Analysis of interatomic Contacts of Structural Units in PDB entry:
6BB8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BB8 entry

There is 1 chain in PDB entry 6BB8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 141LEU 1106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6BB8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
182 194Right-handed alpha
Helix 2
AA2
A
203 206Right-handed 310
Helix 3
AA3
A
207 222Right-handed alpha
Helix 4
AA4
A
232 248Right-handed alpha
Helix 5
AA5
A
270 279Right-handed alpha
Helix 6
AA6
A
282 286Right-handed alpha
Helix 7
AA7
A
294 300Right-handed 310
Helix 8
AA8
A
303 314Right-handed alpha
Helix 9
AA9
A
329 342Right-handed alpha
Helix 10
AB1
A
380 393Right-handed alpha
Helix 11
AB2
A
426 438Right-handed alpha
Helix 12
AB3
A
449 461Right-handed alpha
Helix 13
AB4
A
467 483Right-handed alpha
Helix 14
AB5
A
492 497Right-handed alpha
Helix 15
AB6
A
498 504Right-handed alpha
Helix 16
AB7
A
514 527Right-handed alpha
Helix 17
AB8
A
537 542Right-handed 310
Helix 18
AB9
A
567 576Right-handed alpha
Helix 19
AC1
A
598 607Right-handed alpha
Helix 20
AC2
A
620 630Right-handed alpha
Helix 21
AC3
A
634 642Right-handed alpha
Helix 22
AC4
A
642 670Right-handed alpha
Helix 23
AC5
A
675 699Right-handed alpha
Helix 24
AC6
A
700 705Right-handed alpha
Helix 25
AC7
A
815 832Right-handed alpha
Helix 26
AC8
A
851 856Right-handed alpha
Helix 27
AC9
A
857 870Right-handed alpha
Helix 28
AD1
A
871 875Right-handed 310
Helix 29
AD2
A
878 904Right-handed alpha
Helix 30
AD3
A
907 924Right-handed alpha
Helix 31
AD4
A
934 941Right-handed alpha
Helix 32
AD5
A
950 960Right-handed alpha
Helix 33
AD6
A
966 976Right-handed alpha
Helix 34
AD7
A
989 1013Right-handed alpha
Helix 35
AD8
A
1018 1026Right-handed alpha
Helix 36
AD9
A
1030 1039Right-handed alpha
Helix 37
AE1
A
1042 1049Right-handed alpha
Helix 38
AE2
A
1053 1077Right-handed alpha
Helix 39
AE3
A
1080 1095Right-handed alpha
Helix 40
AE4
A
1096 1101Right-handed 310
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There are 4 sheets in PDB entry 6BB8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 152first strand
Strand 2
A
345 350anti-parallel
Strand 3
A
197 201parallel
Strand 4
A
319 324parallel
Strand 5
A
287 292parallel
Strand 6
A
225 230parallel
Strand 7
A
265 269parallel
Strand 8
A
250 253parallel
Strand 9
A
258 259anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 373first strand
Strand 2
A
357 363anti-parallel
Strand 3
A
587 593parallel
Strand 4
A
549 552parallel
Strand 5
A
443 446parallel
Strand 6
A
532 535parallel
Strand 7
A
506 509parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 558first strand
Strand 2
A
563 565anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
713 715first strand
Strand 2
A
726 734anti-parallel
Strand 3
A
751 757anti-parallel
Strand 4
A
790 795anti-parallel
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