Analysis of interatomic Contacts of Structural Units in PDB entry:
6BB9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BB9 entry

There are 2 chains in PDB entry 6BB9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ASN 269
B
 MET 1ASN 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6BB9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 22Right-handed alpha
Helix 2
AA2
A
38 53Right-handed alpha
Helix 3
AA3
A
59 72Right-handed alpha
Helix 4
AA4
A
111 120Right-handed alpha
Helix 5
AA5
A
144 155Right-handed alpha
Helix 6
AA6
A
199 210Right-handed alpha
Helix 7
AA7
A
222 229Right-handed alpha
Helix 8
AA8
A
255 266Right-handed alpha
Helix 9
AA9
B
16 22Right-handed alpha
Helix 10
AB1
B
38 53Right-handed alpha
Helix 11
AB2
B
59 72Right-handed alpha
Helix 12
AB3
B
111 120Right-handed alpha
Helix 13
AB4
B
144 155Right-handed alpha
Helix 14
AB5
B
199 210Right-handed alpha
Helix 15
AB6
B
222 228Right-handed alpha
Helix 16
AB7
B
255 266Right-handed alpha
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There are 7 sheets in PDB entry 6BB9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
2 4anti-parallel
Strand 3
A
101 107anti-parallel
Strand 4
A
76 84anti-parallel
Strand 5
A
24 32anti-parallel
Strand 6
A
35 36anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
B
11 13anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 174first strand
Strand 2
A
161 165anti-parallel
Strand 3
A
121 125parallel
Strand 4
A
241 247parallel
Strand 5
A
231 235anti-parallel
Strand 6
A
178 183anti-parallel
Strand 7
A
186 190anti-parallel
Strand 8
A
215 219parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 174first strand
Strand 2
A
161 165anti-parallel
Strand 3
A
121 125parallel
Strand 4
A
241 247parallel
Strand 5
A
250 251anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 8first strand
Strand 2
B
3 4anti-parallel
Strand 3
B
101 107anti-parallel
Strand 4
B
76 84anti-parallel
Strand 5
B
24 32anti-parallel
Strand 6
B
35 36anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 174first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
121 125parallel
Strand 4
B
241 247parallel
Strand 5
B
231 235anti-parallel
Strand 6
B
178 183anti-parallel
Strand 7
B
186 190anti-parallel
Strand 8
B
215 219parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 174first strand
Strand 2
B
161 165anti-parallel
Strand 3
B
121 125parallel
Strand 4
B
241 247parallel
Strand 5
B
250 251anti-parallel
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