Analysis of interatomic Contacts of Structural Units in PDB entry:
6BCO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BCO entry

There are 4 chains in PDB entry 6BCO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 12	GLY 1162
A	PRO 12	GLY 1162
C	PRO 12	GLY 1162
D	PRO 12	GLY 1162

There are196 helices in PDB entry 6BCO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	14	20	Right-handed alpha
Helix 2	AA2	B	99	110	Right-handed alpha
Helix 3	AA3	B	132	142	Right-handed alpha
Helix 4	AA4	B	143	151	Right-handed alpha
Helix 5	AA5	B	162	177	Right-handed alpha
Helix 6	AA6	B	193	195	Right-handed 310
Helix 7	AA7	B	247	259	Right-handed alpha
Helix 8	AA8	B	282	294	Right-handed alpha
Helix 9	AA9	B	305	317	Right-handed alpha
Helix 10	AB1	B	332	338	Right-handed alpha
Helix 11	AB2	B	344	359	Right-handed alpha
Helix 12	AB3	B	372	385	Right-handed alpha
Helix 13	AB4	B	390	404	Right-handed alpha
Helix 14	AB5	B	406	414	Right-handed alpha
Helix 15	AB6	B	422	436	Right-handed alpha
Helix 16	AB7	B	438	448	Right-handed alpha
Helix 17	AB8	B	451	456	Right-handed alpha
Helix 18	AB9	B	457	465	Right-handed alpha
Helix 19	AC1	B	472	482	Right-handed alpha
Helix 20	AC2	B	502	512	Right-handed alpha
Helix 21	AC3	B	558	569	Right-handed alpha
Helix 22	AC4	B	571	582	Right-handed alpha
Helix 23	AC5	B	584	602	Right-handed alpha
Helix 24	AC6	B	605	634	Right-handed alpha
Helix 25	AC7	B	634	643	Right-handed alpha
Helix 26	AC8	B	653	661	Right-handed alpha
Helix 27	AC9	B	663	668	Right-handed alpha
Helix 28	AD1	B	669	682	Right-handed alpha
Helix 29	AD2	B	689	699	Right-handed alpha
Helix 30	AD3	B	700	704	Right-handed 310
Helix 31	AD4	B	766	772	Right-handed alpha
Helix 32	AD5	B	774	799	Right-handed alpha
Helix 33	AD6	B	807	830	Right-handed alpha
Helix 34	AD7	B	849	857	Right-handed alpha
Helix 35	AD8	B	859	880	Right-handed alpha
Helix 36	AD9	B	883	901	Right-handed alpha
Helix 37	AE1	B	901	906	Right-handed alpha
Helix 38	AE2	B	907	909	Right-handed 310
Helix 39	AE3	B	912	920	Right-handed alpha
Helix 40	AE4	B	922	948	Right-handed alpha
Helix 41	AE5	B	954	969	Right-handed alpha
Helix 42	AE6	B	970	972	Right-handed 310
Helix 43	AE7	B	980	984	Right-handed 310
Helix 44	AE8	B	1013	1029	Right-handed alpha
Helix 45	AE9	B	1029	1067	Right-handed alpha
Helix 46	AF1	B	1072	1075	Right-handed 310
Helix 47	AF2	B	1076	1090	Right-handed alpha
Helix 48	AF3	B	1113	1141	Right-handed alpha
Helix 49	AF4	B	1142	1162	Right-handed alpha
Helix 50	AF5	A	14	20	Right-handed alpha
Helix 51	AF6	A	99	110	Right-handed alpha
Helix 52	AF7	A	132	142	Right-handed alpha
Helix 53	AF8	A	143	151	Right-handed alpha
Helix 54	AF9	A	162	177	Right-handed alpha
Helix 55	AG1	A	193	195	Right-handed 310
Helix 56	AG2	A	247	259	Right-handed alpha
Helix 57	AG3	A	282	294	Right-handed alpha
Helix 58	AG4	A	305	317	Right-handed alpha
Helix 59	AG5	A	332	338	Right-handed alpha
Helix 60	AG6	A	344	359	Right-handed alpha
Helix 61	AG7	A	372	385	Right-handed alpha
Helix 62	AG8	A	390	404	Right-handed alpha
Helix 63	AG9	A	406	414	Right-handed alpha
Helix 64	AH1	A	422	436	Right-handed alpha
Helix 65	AH2	A	438	448	Right-handed alpha
Helix 66	AH3	A	451	456	Right-handed alpha
Helix 67	AH4	A	457	465	Right-handed alpha
Helix 68	AH5	A	472	482	Right-handed alpha
Helix 69	AH6	A	502	512	Right-handed alpha
Helix 70	AH7	A	558	569	Right-handed alpha
Helix 71	AH8	A	571	582	Right-handed alpha
Helix 72	AH9	A	584	602	Right-handed alpha
Helix 73	AI1	A	605	634	Right-handed alpha
Helix 74	AI2	A	634	643	Right-handed alpha
Helix 75	AI3	A	653	661	Right-handed alpha
Helix 76	AI4	A	663	668	Right-handed alpha
Helix 77	AI5	A	669	682	Right-handed alpha
Helix 78	AI6	A	689	699	Right-handed alpha
Helix 79	AI7	A	700	704	Right-handed 310
Helix 80	AI8	A	766	772	Right-handed alpha
Helix 81	AI9	A	774	799	Right-handed alpha
Helix 82	AJ1	A	807	830	Right-handed alpha
Helix 83	AJ2	A	849	857	Right-handed alpha
Helix 84	AJ3	A	859	880	Right-handed alpha
Helix 85	AJ4	A	883	901	Right-handed alpha
Helix 86	AJ5	A	901	906	Right-handed alpha
Helix 87	AJ6	A	907	909	Right-handed 310
Helix 88	AJ7	A	912	920	Right-handed alpha
Helix 89	AJ8	A	922	948	Right-handed alpha
Helix 90	AJ9	A	954	969	Right-handed alpha
Helix 91	AK1	A	970	972	Right-handed 310
Helix 92	AK2	A	980	984	Right-handed 310
Helix 93	AK3	A	1013	1029	Right-handed alpha
Helix 94	AK4	A	1029	1067	Right-handed alpha
Helix 95	AK5	A	1072	1075	Right-handed 310
Helix 96	AK6	A	1076	1090	Right-handed alpha
Helix 97	AK7	A	1113	1141	Right-handed alpha
Helix 98	AK8	A	1142	1162	Right-handed alpha
Helix 99	AK9	C	14	20	Right-handed alpha
Helix 100	AL1	C	99	110	Right-handed alpha
Helix 101	AL2	C	132	142	Right-handed alpha
Helix 102	AL3	C	143	151	Right-handed alpha
Helix 103	AL4	C	162	177	Right-handed alpha
Helix 104	AL5	C	193	195	Right-handed 310
Helix 105	AL6	C	247	259	Right-handed alpha
Helix 106	AL7	C	282	294	Right-handed alpha
Helix 107	AL8	C	305	317	Right-handed alpha
Helix 108	AL9	C	332	338	Right-handed alpha
Helix 109	AM1	C	344	359	Right-handed alpha
Helix 110	AM2	C	372	385	Right-handed alpha
Helix 111	AM3	C	390	404	Right-handed alpha
Helix 112	AM4	C	406	414	Right-handed alpha
Helix 113	AM5	C	422	436	Right-handed alpha
Helix 114	AM6	C	438	448	Right-handed alpha
Helix 115	AM7	C	451	456	Right-handed alpha
Helix 116	AM8	C	457	465	Right-handed alpha
Helix 117	AM9	C	472	482	Right-handed alpha
Helix 118	AN1	C	502	512	Right-handed alpha
Helix 119	AN2	C	558	569	Right-handed alpha
Helix 120	AN3	C	571	582	Right-handed alpha
Helix 121	AN4	C	584	602	Right-handed alpha
Helix 122	AN5	C	605	634	Right-handed alpha
Helix 123	AN6	C	634	643	Right-handed alpha
Helix 124	AN7	C	653	661	Right-handed alpha
Helix 125	AN8	C	663	668	Right-handed alpha
Helix 126	AN9	C	669	682	Right-handed alpha
Helix 127	AO1	C	689	699	Right-handed alpha
Helix 128	AO2	C	700	704	Right-handed 310
Helix 129	AO3	C	766	772	Right-handed alpha
Helix 130	AO4	C	774	799	Right-handed alpha
Helix 131	AO5	C	807	830	Right-handed alpha
Helix 132	AO6	C	849	857	Right-handed alpha
Helix 133	AO7	C	859	880	Right-handed alpha
Helix 134	AO8	C	883	901	Right-handed alpha
Helix 135	AO9	C	901	906	Right-handed alpha
Helix 136	AP1	C	907	909	Right-handed 310
Helix 137	AP2	C	912	920	Right-handed alpha
Helix 138	AP3	C	922	948	Right-handed alpha
Helix 139	AP4	C	954	969	Right-handed alpha
Helix 140	AP5	C	970	972	Right-handed 310
Helix 141	AP6	C	980	984	Right-handed 310
Helix 142	AP7	C	1013	1029	Right-handed alpha
Helix 143	AP8	C	1029	1067	Right-handed alpha
Helix 144	AP9	C	1072	1075	Right-handed 310
Helix 145	AQ1	C	1076	1090	Right-handed alpha
Helix 146	AQ2	C	1113	1141	Right-handed alpha
Helix 147	AQ3	C	1142	1162	Right-handed alpha
Helix 148	AQ4	D	14	20	Right-handed alpha
Helix 149	AQ5	D	99	110	Right-handed alpha
Helix 150	AQ6	D	132	142	Right-handed alpha
Helix 151	AQ7	D	143	151	Right-handed alpha
Helix 152	AQ8	D	162	177	Right-handed alpha
Helix 153	AQ9	D	193	195	Right-handed 310
Helix 154	AR1	D	247	259	Right-handed alpha
Helix 155	AR2	D	282	294	Right-handed alpha
Helix 156	AR3	D	305	317	Right-handed alpha
Helix 157	AR4	D	332	338	Right-handed alpha
Helix 158	AR5	D	344	359	Right-handed alpha
Helix 159	AR6	D	372	385	Right-handed alpha
Helix 160	AR7	D	390	404	Right-handed alpha
Helix 161	AR8	D	406	414	Right-handed alpha
Helix 162	AR9	D	422	436	Right-handed alpha
Helix 163	AS1	D	438	448	Right-handed alpha
Helix 164	AS2	D	451	456	Right-handed alpha
Helix 165	AS3	D	457	465	Right-handed alpha
Helix 166	AS4	D	472	482	Right-handed alpha
Helix 167	AS5	D	502	512	Right-handed alpha
Helix 168	AS6	D	558	569	Right-handed alpha
Helix 169	AS7	D	571	582	Right-handed alpha
Helix 170	AS8	D	584	602	Right-handed alpha
Helix 171	AS9	D	605	634	Right-handed alpha
Helix 172	AT1	D	634	643	Right-handed alpha
Helix 173	AT2	D	653	661	Right-handed alpha
Helix 174	AT3	D	663	668	Right-handed alpha
Helix 175	AT4	D	669	682	Right-handed alpha
Helix 176	AT5	D	689	699	Right-handed alpha
Helix 177	AT6	D	700	704	Right-handed 310
Helix 178	AT7	D	766	772	Right-handed alpha
Helix 179	AT8	D	774	799	Right-handed alpha
Helix 180	AT9	D	807	830	Right-handed alpha
Helix 181	AU1	D	849	857	Right-handed alpha
Helix 182	AU2	D	859	880	Right-handed alpha
Helix 183	AU3	D	883	901	Right-handed alpha
Helix 184	AU4	D	901	906	Right-handed alpha
Helix 185	AU5	D	907	909	Right-handed 310
Helix 186	AU6	D	912	920	Right-handed alpha
Helix 187	AU7	D	922	948	Right-handed alpha
Helix 188	AU8	D	954	969	Right-handed alpha
Helix 189	AU9	D	970	972	Right-handed 310
Helix 190	AV1	D	980	984	Right-handed 310
Helix 191	AV2	D	1013	1029	Right-handed alpha
Helix 192	AV3	D	1029	1067	Right-handed alpha
Helix 193	AV4	D	1072	1075	Right-handed 310
Helix 194	AV5	D	1076	1090	Right-handed alpha
Helix 195	AV6	D	1113	1141	Right-handed alpha
Helix 196	AV7	D	1142	1162	Right-handed alpha

There are 12 sheets in PDB entry 6BCO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	23	first strand
Strand 2	B	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	211	212	first strand
Strand 2	B	76	81	parallel
Strand 3	B	89	95	anti-parallel
Strand 4	B	232	237	parallel
Strand 5	B	186	191	parallel
Strand 6	B	153	157	parallel
Strand 7	B	119	123	parallel
Strand 8	B	274	278	parallel
Strand 9	B	299	301	parallel
Strand 10	B	362	364	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	985	987	first strand
Strand 2	B	996	998	anti-parallel
Strand 3	B	1008	1009	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	211	212	first strand
Strand 2	A	76	81	parallel
Strand 3	A	89	95	anti-parallel
Strand 4	A	232	237	parallel
Strand 5	A	186	191	parallel
Strand 6	A	153	157	parallel
Strand 7	A	119	123	parallel
Strand 8	A	274	278	parallel
Strand 9	A	299	301	parallel
Strand 10	A	362	364	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	985	987	first strand
Strand 2	A	996	998	anti-parallel
Strand 3	A	1008	1009	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	23	first strand
Strand 2	C	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	211	212	first strand
Strand 2	C	76	81	parallel
Strand 3	C	89	95	anti-parallel
Strand 4	C	232	237	parallel
Strand 5	C	186	191	parallel
Strand 6	C	153	157	parallel
Strand 7	C	119	123	parallel
Strand 8	C	274	278	parallel
Strand 9	C	299	301	parallel
Strand 10	C	362	364	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	985	987	first strand
Strand 2	C	996	998	anti-parallel
Strand 3	C	1008	1009	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	23	first strand
Strand 2	D	70	72	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	211	212	first strand
Strand 2	D	76	81	parallel
Strand 3	D	89	95	anti-parallel
Strand 4	D	232	237	parallel
Strand 5	D	186	191	parallel
Strand 6	D	153	157	parallel
Strand 7	D	119	123	parallel
Strand 8	D	274	278	parallel
Strand 9	D	299	301	parallel
Strand 10	D	362	364	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	985	987	first strand
Strand 2	D	996	998	anti-parallel
Strand 3	D	1008	1009	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BCO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BCO