Analysis of interatomic Contacts of Structural Units in PDB entry:
6BDS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BDS entry

There is 1 chain in PDB entry 6BDS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LEU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6BDS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
37 45Right-handed alpha
Helix 3
AA3
A
48 59Right-handed alpha
Helix 4
AA4
A
60 62Right-handed 310
Helix 5
AA5
A
69 83Right-handed alpha
Helix 6
AA6
A
94 96Right-handed 310
Helix 7
AA7
A
97 105Right-handed alpha
Helix 8
AA8
A
116 128Right-handed alpha
Helix 9
AA9
A
134 147Right-handed alpha
Helix 10
AB1
A
150 166Right-handed alpha
Helix 11
AB2
A
174 193Right-handed alpha
Helix 12
AB3
A
194 196Right-handed 310
Helix 13
AB4
A
206 215Right-handed alpha
Helix 14
AB5
A
229 244Right-handed alpha
Helix 15
AB6
A
249 253Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6BDS.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
88 89parallel
Strand 3
A
10 12parallel
Strand 4
A
109 114parallel
Strand 5
A
198 202parallel
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