Analysis of interatomic Contacts of Structural Units in PDB entry:
6BDX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BDX entry

There is 1 chain in PDB entry 6BDX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ASN 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6BDX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
62 69Right-handed alpha
Helix 3
AA3
A
78 93Right-handed alpha
Helix 4
AA4
A
104 115Right-handed alpha
Helix 5
AA5
A
127 144Right-handed alpha
Helix 6
AA6
A
165 179Right-handed alpha
Helix 7
AA7
A
237 252Right-handed alpha
Helix 8
AA8
A
259 265Right-handed alpha
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There are 2 sheets in PDB entry 6BDX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 34first strand
Strand 2
A
4 8parallel
Strand 3
A
72 75parallel
Strand 4
A
95 98parallel
Strand 5
A
119 122parallel
Strand 6
A
256 258parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 209first strand
Strand 2
A
149 156parallel
Strand 3
A
215 223anti-parallel
Strand 4
A
226 234anti-parallel
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