Analysis of interatomic Contacts of Structural Units in PDB entry:
6BE4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BE4 entry

There are 2 chains in PDB entry 6BE4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 GLN 1PRO 224
L
 GLN 1PRO 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6BE4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
63 65Right-handed 310
Helix 2
AA2
H
73 75Right-handed 310
Helix 3
AA3
H
86 90Right-handed 310
Helix 4
AA4
H
167 169Right-handed 310
Helix 5
AA5
H
198 201Right-handed 310
Helix 6
AA6
H
212 215Right-handed 310
Helix 7
AA7
L
26 29Right-handed 310
Helix 8
AA8
L
83 87Right-handed 310
Helix 9
AA9
L
126 132Right-handed alpha
Helix 10
AB1
L
186 193Right-handed alpha
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There are 12 sheets in PDB entry 6BE4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
77 82anti-parallel
Strand 4
H
67 72anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
118 122parallel
Strand 3
H
91 101anti-parallel
Strand 4
H
107 108anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
56 59first strand
Strand 2
H
46 52anti-parallel
Strand 3
H
32 39anti-parallel
Strand 4
H
91 101anti-parallel
Strand 5
H
113 114anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 135first strand
Strand 2
H
146 156anti-parallel
Strand 3
H
187 196anti-parallel
Strand 4
H
174 176anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
131 135first strand
Strand 2
H
146 156anti-parallel
Strand 3
H
187 196anti-parallel
Strand 4
H
180 181anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
162 165first strand
Strand 2
H
206 211anti-parallel
Strand 3
H
216 221anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 6first strand
Strand 2
L
18 24anti-parallel
Strand 3
L
74 79anti-parallel
Strand 4
L
66 71anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 13first strand
Strand 2
L
106 111parallel
Strand 3
L
88 96anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 50anti-parallel
Strand 6
L
56 58anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
9 13first strand
Strand 2
L
106 111parallel
Strand 3
L
88 96anti-parallel
Strand 4
L
99 102anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
119 123first strand
Strand 2
L
135 144anti-parallel
Strand 3
L
177 185anti-parallel
Strand 4
L
164 166anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
119 123first strand
Strand 2
L
135 144anti-parallel
Strand 3
L
177 185anti-parallel
Strand 4
L
170 171anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
158 160first strand
Strand 2
L
150 155anti-parallel
Strand 3
L
196 202anti-parallel
Strand 4
L
205 211anti-parallel
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