Analysis of interatomic Contacts of Structural Units in PDB entry:
6BE6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BE6 entry

There are 4 chains in PDB entry 6BE6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 218	GLY 655
B	GLU 218	GLY 655
C	ALA 217	GLY 655
D	GLU 218	GLY 655

There are 55 helices in PDB entry 6BE6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	229	237	Right-handed alpha
Helix 2	AA2	A	238	259	Right-handed alpha
Helix 3	AA3	A	279	285	Right-handed 310
Helix 4	AA4	A	296	306	Right-handed alpha
Helix 5	AA5	A	324	327	Right-handed 310
Helix 6	AA6	A	373	389	Right-handed alpha
Helix 7	AA7	A	400	404	Right-handed 310
Helix 8	AA8	A	406	412	Right-handed alpha
Helix 9	AA9	A	427	431	Right-handed 310
Helix 10	AB1	A	433	448	Right-handed alpha
Helix 11	AB2	A	449	451	Right-handed 310
Helix 12	AB3	A	570	575	Right-handed 310
Helix 13	AB4	A	603	607	Right-handed 310
Helix 14	AB5	A	613	618	Right-handed 310
Helix 15	AB6	B	229	237	Right-handed alpha
Helix 16	AB7	B	238	259	Right-handed alpha
Helix 17	AB8	B	279	283	Right-handed 310
Helix 18	AB9	B	296	306	Right-handed alpha
Helix 19	AC1	B	323	327	Right-handed 310
Helix 20	AC2	B	373	389	Right-handed alpha
Helix 21	AC3	B	400	404	Right-handed 310
Helix 22	AC4	B	406	411	Right-handed alpha
Helix 23	AC5	B	427	431	Right-handed 310
Helix 24	AC6	B	433	448	Right-handed alpha
Helix 25	AC7	B	490	494	Right-handed 310
Helix 26	AC8	B	570	576	Right-handed 310
Helix 27	AC9	C	229	237	Right-handed alpha
Helix 28	AD1	C	238	259	Right-handed alpha
Helix 29	AD2	C	279	283	Right-handed 310
Helix 30	AD3	C	288	292	Right-handed 310
Helix 31	AD4	C	296	306	Right-handed alpha
Helix 32	AD5	C	323	327	Right-handed 310
Helix 33	AD6	C	373	389	Right-handed alpha
Helix 34	AD7	C	396	404	Right-handed 310
Helix 35	AD8	C	406	411	Right-handed alpha
Helix 36	AD9	C	427	431	Right-handed 310
Helix 37	AE1	C	433	447	Right-handed alpha
Helix 38	AE2	C	448	451	Right-handed 310
Helix 39	AE3	C	570	575	Right-handed 310
Helix 40	AE4	C	603	607	Right-handed 310
Helix 41	AE5	D	229	237	Right-handed alpha
Helix 42	AE6	D	238	259	Right-handed alpha
Helix 43	AE7	D	279	285	Right-handed 310
Helix 44	AE8	D	296	306	Right-handed alpha
Helix 45	AE9	D	323	327	Right-handed 310
Helix 46	AF1	D	373	389	Right-handed alpha
Helix 47	AF2	D	400	404	Right-handed 310
Helix 48	AF3	D	406	411	Right-handed alpha
Helix 49	AF4	D	426	431	Right-handed 310
Helix 50	AF5	D	433	448	Right-handed alpha
Helix 51	AF6	D	449	451	Right-handed 310
Helix 52	AF7	D	475	479	Right-handed 310
Helix 53	AF8	D	570	576	Right-handed 310
Helix 54	AF9	D	603	607	Right-handed 310
Helix 55	AG1	D	615	620	Right-handed alpha

There are 28 sheets in PDB entry 6BE6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	277	first strand
Strand 2	A	219	228	parallel
Strand 3	A	314	322	parallel
Strand 4	A	360	367	parallel
Strand 5	A	370	371	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	331	first strand
Strand 2	A	360	367	anti-parallel
Strand 3	A	314	322	parallel
Strand 4	A	219	228	parallel
Strand 5	A	453	454	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	355	356	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	523	525	first strand
Strand 2	A	534	535	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	561	563	first strand
Strand 2	A	566	568	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	577	580	first strand
Strand 2	A	597	600	anti-parallel
Strand 3	A	608	609	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	631	632	first strand
Strand 2	A	637	639	anti-parallel
Strand 3	A	645	647	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	277	first strand
Strand 2	B	219	228	parallel
Strand 3	B	314	319	parallel
Strand 4	B	360	364	parallel
Strand 5	B	329	331	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	277	first strand
Strand 2	B	219	228	parallel
Strand 3	B	453	454	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	349	first strand
Strand 2	B	355	357	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	367	first strand
Strand 2	B	370	371	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	523	525	first strand
Strand 2	B	534	535	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	578	580	first strand
Strand 2	B	597	600	anti-parallel
Strand 3	B	603	609	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	631	632	first strand
Strand 2	B	637	639	anti-parallel
Strand 3	B	645	647	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	277	first strand
Strand 2	C	219	228	parallel
Strand 3	C	314	319	parallel
Strand 4	C	360	364	parallel
Strand 5	C	329	331	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	277	first strand
Strand 2	C	219	228	parallel
Strand 3	C	453	454	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	355	356	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	367	first strand
Strand 2	C	370	371	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	522	523	first strand
Strand 2	C	535	536	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	561	562	first strand
Strand 2	C	567	568	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	577	580	first strand
Strand 2	C	597	600	anti-parallel
Strand 3	C	608	609	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	631	632	first strand
Strand 2	C	637	639	anti-parallel
Strand 3	C	645	647	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	277	first strand
Strand 2	D	221	228	parallel
Strand 3	D	315	319	parallel
Strand 4	D	360	364	parallel
Strand 5	D	329	331	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	367	first strand
Strand 2	D	370	371	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	511	512	first strand
Strand 2	D	516	517	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	561	563	first strand
Strand 2	D	566	568	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	578	580	first strand
Strand 2	D	597	599	anti-parallel
Strand 3	D	608	609	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	631	632	first strand
Strand 2	D	637	639	anti-parallel
Strand 3	D	645	647	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BE6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BE6