Analysis of interatomic Contacts of Structural Units in PDB entry:
6BF8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BF8 entry

There are 2 chains in PDB entry 6BF8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 46HIS 1011
B
 ALA 46HIS 1011
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 6BF8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 60Right-handed 310
Helix 2
AA2
A
105 116Right-handed alpha
Helix 3
AA3
A
125 134Right-handed alpha
Helix 4
AA4
A
157 167Right-handed alpha
Helix 5
AA5
A
168 170Right-handed 310
Helix 6
AA6
A
175 193Right-handed alpha
Helix 7
AA7
A
196 208Right-handed alpha
Helix 8
AA8
A
213 217Right-handed 310
Helix 9
AA9
A
222 227Right-handed alpha
Helix 10
AB1
A
228 233Right-handed alpha
Helix 11
AB2
A
236 248Right-handed alpha
Helix 12
AB3
A
264 275Right-handed alpha
Helix 13
AB4
A
329 339Right-handed alpha
Helix 14
AB5
A
345 354Right-handed alpha
Helix 15
AB6
A
380 386Right-handed alpha
Helix 16
AB7
A
386 405Right-handed alpha
Helix 17
AB8
A
407 423Right-handed alpha
Helix 18
AB9
A
432 441Right-handed alpha
Helix 19
AC1
A
442 444Right-handed 310
Helix 20
AC2
A
460 471Right-handed alpha
Helix 21
AC3
A
506 516Right-handed alpha
Helix 22
AC4
A
586 615Right-handed alpha
Helix 23
AC5
A
637 651Right-handed alpha
Helix 24
AC6
A
655 671Right-handed alpha
Helix 25
AC7
A
672 675Right-handed 310
Helix 26
AC8
A
677 690Right-handed alpha
Helix 27
AC9
A
696 703Right-handed alpha
Helix 28
AD1
A
704 706Right-handed 310
Helix 29
AD2
A
708 721Right-handed alpha
Helix 30
AD3
A
734 754Right-handed alpha
Helix 31
AD4
A
801 815Right-handed alpha
Helix 32
AD5
A
816 823Right-handed alpha
Helix 33
AD6
A
855 876Right-handed alpha
Helix 34
AD7
A
878 894Right-handed alpha
Helix 35
AD8
A
899 912Right-handed alpha
Helix 36
AD9
A
919 929Right-handed alpha
Helix 37
AE1
A
932 942Right-handed alpha
Helix 38
AE2
A
994 999Right-handed alpha
Helix 39
AE3
B
95 99Right-handed 310
Helix 40
AE4
B
105 114Right-handed alpha
Helix 41
AE5
B
125 133Right-handed alpha
Helix 42
AE6
B
157 171Right-handed alpha
Helix 43
AE7
B
176 192Right-handed alpha
Helix 44
AE8
B
196 208Right-handed alpha
Helix 45
AE9
B
213 217Right-handed 310
Helix 46
AF1
B
222 228Right-handed alpha
Helix 47
AF2
B
228 233Right-handed alpha
Helix 48
AF3
B
236 248Right-handed alpha
Helix 49
AF4
B
265 275Right-handed alpha
Helix 50
AF5
B
329 339Right-handed alpha
Helix 51
AF6
B
345 353Right-handed alpha
Helix 52
AF7
B
386 405Right-handed alpha
Helix 53
AF8
B
408 424Right-handed alpha
Helix 54
AF9
B
432 442Right-handed alpha
Helix 55
AG1
B
460 471Right-handed alpha
Helix 56
AG2
B
472 476Right-handed 310
Helix 57
AG3
B
506 516Right-handed alpha
Helix 58
AG4
B
581 584Right-handed 310
Helix 59
AG5
B
586 613Right-handed alpha
Helix 60
AG6
B
637 651Right-handed alpha
Helix 61
AG7
B
655 672Right-handed alpha
Helix 62
AG8
B
673 676Right-handed 310
Helix 63
AG9
B
677 690Right-handed alpha
Helix 64
AH1
B
696 703Right-handed alpha
Helix 65
AH2
B
704 707Right-handed 310
Helix 66
AH3
B
708 721Right-handed alpha
Helix 67
AH4
B
735 754Right-handed alpha
Helix 68
AH5
B
801 815Right-handed alpha
Helix 69
AH6
B
816 823Right-handed alpha
Helix 70
AH7
B
855 876Right-handed alpha
Helix 71
AH8
B
878 892Right-handed alpha
Helix 72
AH9
B
899 912Right-handed alpha
Helix 73
AI1
B
919 930Right-handed alpha
Helix 74
AI2
B
932 943Right-handed alpha
Helix 75
AI3
B
994 999Right-handed alpha
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There are 10 sheets in PDB entry 6BF8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
73 79anti-parallel
Strand 3
A
254 260parallel
Strand 4
A
86 92anti-parallel
Strand 5
A
147 153anti-parallel
Strand 6
A
139 142anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
303 304first strand
Strand 2
A
477 482parallel
Strand 3
A
311 320anti-parallel
Strand 4
A
370 378anti-parallel
Strand 5
A
359 364anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
499 500anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 553first strand
Strand 2
A
558 563anti-parallel
Strand 3
A
726 731parallel
Strand 4
A
571 579anti-parallel
Strand 5
A
626 634anti-parallel
Strand 6
A
617 622anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
776 777first strand
Strand 2
A
953 958parallel
Strand 3
A
789 795anti-parallel
Strand 4
A
846 852anti-parallel
Strand 5
A
832 837anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 69first strand
Strand 2
B
73 79anti-parallel
Strand 3
B
254 260parallel
Strand 4
B
87 92anti-parallel
Strand 5
B
147 152anti-parallel
Strand 6
B
139 142anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 365first strand
Strand 2
B
371 378anti-parallel
Strand 3
B
312 319anti-parallel
Strand 4
B
477 481anti-parallel
Strand 5
B
303 304parallel
Strand 6
B
499 501anti-parallel
Strand 7
B
491 492anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
549 553first strand
Strand 2
B
558 563anti-parallel
Strand 3
B
724 731parallel
Strand 4
B
572 579anti-parallel
Strand 5
B
626 633anti-parallel
Strand 6
B
617 620anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
776 777first strand
Strand 2
B
953 959parallel
Strand 3
B
780 782parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
776 777first strand
Strand 2
B
953 959parallel
Strand 3
B
789 795anti-parallel
Strand 4
B
846 852anti-parallel
Strand 5
B
832 837anti-parallel
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