Analysis of interatomic Contacts of Structural Units in PDB entry:
6BFG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BFG entry

There are 2 chains in PDB entry 6BFG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3GLU 375
B
 GLN 3GLU 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6BFG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
20 29Right-handed alpha
Helix 3
AA3
A
34 43Right-handed alpha
Helix 4
AA4
A
44 47Right-handed 310
Helix 5
AA5
A
82 86Right-handed 310
Helix 6
AA6
A
89 101Right-handed alpha
Helix 7
AA7
A
114 122Right-handed alpha
Helix 8
AA8
A
134 148Right-handed alpha
Helix 9
AA9
A
165 172Right-handed alpha
Helix 10
AB1
A
180 189Right-handed alpha
Helix 11
AB2
A
190 201Right-handed alpha
Helix 12
AB3
A
205 209Right-handed 310
Helix 13
AB4
A
215 227Right-handed alpha
Helix 14
AB5
A
232 243Right-handed alpha
Helix 15
AB6
A
254 264Right-handed alpha
Helix 16
AB7
A
273 277Right-handed 310
Helix 17
AB8
A
284 287Right-handed 310
Helix 18
AB9
A
288 297Right-handed alpha
Helix 19
AC1
A
308 319Right-handed alpha
Helix 20
AC2
A
326 360Right-handed alpha
Helix 21
AC3
A
363 367Right-handed 310
Helix 22
AC4
A
368 370Right-handed 310
Helix 23
AC5
B
7 19Right-handed alpha
Helix 24
AC6
B
20 29Right-handed alpha
Helix 25
AC7
B
34 43Right-handed alpha
Helix 26
AC8
B
44 47Right-handed 310
Helix 27
AC9
B
82 86Right-handed 310
Helix 28
AD1
B
89 101Right-handed alpha
Helix 29
AD2
B
114 122Right-handed alpha
Helix 30
AD3
B
134 148Right-handed alpha
Helix 31
AD4
B
165 172Right-handed alpha
Helix 32
AD5
B
180 189Right-handed alpha
Helix 33
AD6
B
190 201Right-handed alpha
Helix 34
AD7
B
205 209Right-handed 310
Helix 35
AD8
B
215 227Right-handed alpha
Helix 36
AD9
B
232 243Right-handed alpha
Helix 37
AE1
B
254 264Right-handed alpha
Helix 38
AE2
B
273 277Right-handed 310
Helix 39
AE3
B
284 287Right-handed 310
Helix 40
AE4
B
288 297Right-handed alpha
Helix 41
AE5
B
308 319Right-handed alpha
Helix 42
AE6
B
326 360Right-handed alpha
Helix 43
AE7
B
363 367Right-handed 310
Helix 44
AE8
B
368 370Right-handed 310
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There are 8 sheets in PDB entry 6BFG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
372 373anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
69 71anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
323 325parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 108first strand
Strand 2
A
126 131parallel
Strand 3
A
152 156parallel
Strand 4
A
246 252parallel
Strand 5
A
268 271parallel
Strand 6
A
300 302parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
372 373anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
69 71anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 77first strand
Strand 2
B
323 325parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 108first strand
Strand 2
B
126 131parallel
Strand 3
B
152 156parallel
Strand 4
B
246 252parallel
Strand 5
B
268 271parallel
Strand 6
B
300 302parallel
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