Analysis of interatomic Contacts of Structural Units in PDB entry:
6BG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BG8 entry

There are 2 chains in PDB entry 6BG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 239
B
 MET 1LEU 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6BG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed 310
Helix 2
AA2
A
41 43Right-handed 310
Helix 3
AA3
A
83 104Right-handed alpha
Helix 4
AA4
A
178 180Right-handed 310
Helix 5
AA5
B
8 12Right-handed 310
Helix 6
AA6
B
41 43Right-handed 310
Helix 7
AA7
B
83 104Right-handed alpha
Helix 8
AA8
B
178 180Right-handed 310
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There are 8 sheets in PDB entry 6BG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
29 31parallel
Strand 3
A
233 236parallel
Strand 4
A
215 222parallel
Strand 5
A
14 18parallel
Strand 6
A
34 37parallel
Strand 7
A
65 66parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
29 31parallel
Strand 3
A
233 236parallel
Strand 4
A
215 222parallel
Strand 5
A
197 204parallel
Strand 6
A
182 186parallel
Strand 7
A
154 158parallel
Strand 8
A
127 131parallel
Strand 9
A
112 114parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 46first strand
Strand 2
A
21 24parallel
Strand 3
A
226 229parallel
Strand 4
A
208 210parallel
Strand 5
A
190 192parallel
Strand 6
A
162 164parallel
Strand 7
A
135 137parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 125first strand
Strand 2
A
142 145parallel
Strand 3
A
171 174parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
29 31parallel
Strand 3
B
233 236parallel
Strand 4
B
215 222parallel
Strand 5
B
14 18parallel
Strand 6
B
34 37parallel
Strand 7
B
65 66parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
29 31parallel
Strand 3
B
233 236parallel
Strand 4
B
215 222parallel
Strand 5
B
197 204parallel
Strand 6
B
182 186parallel
Strand 7
B
154 158parallel
Strand 8
B
127 131parallel
Strand 9
B
112 114parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 46first strand
Strand 2
B
21 24parallel
Strand 3
B
226 229parallel
Strand 4
B
208 210parallel
Strand 5
B
190 192parallel
Strand 6
B
162 164parallel
Strand 7
B
135 137parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 125first strand
Strand 2
B
142 145parallel
Strand 3
B
171 174parallel
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