Analysis of interatomic Contacts of Structural Units in PDB entry:
6BH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BH8 entry

There are 2 chains in PDB entry 6BH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 16LYS 470
B
GLU 16LYS 470
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 6BH8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 48Right-handed alpha
Helix 2
AA2
A
52 56Right-handed 310
Helix 3
AA3
A
101 112Right-handed alpha
Helix 4
AA4
A
118 148Right-handed alpha
Helix 5
AA5
A
148 153Right-handed alpha
Helix 6
AA6
A
159 192Right-handed alpha
Helix 7
AA7
A
195 219Right-handed alpha
Helix 8
AA8
A
219 224Right-handed alpha
Helix 9
AA9
A
232 245Right-handed alpha
Helix 10
AB1
A
257 260Right-handed 310
Helix 11
AB2
A
325 342Right-handed alpha
Helix 12
AB3
A
343 367Right-handed alpha
Helix 13
AB4
A
369 375Right-handed alpha
Helix 14
AB5
A
383 394Right-handed alpha
Helix 15
AB6
A
396 425Right-handed alpha
Helix 16
AB7
A
427 442Right-handed alpha
Helix 17
AB8
A
449 457Right-handed alpha
Helix 18
AB9
A
461 470Right-handed alpha
Helix 19
AC1
B
17 48Right-handed alpha
Helix 20
AC2
B
52 56Right-handed 310
Helix 21
AC3
B
60 95Right-handed alpha
Helix 22
AC4
B
96 112Right-handed alpha
Helix 23
AC5
B
118 148Right-handed alpha
Helix 24
AC6
B
148 153Right-handed alpha
Helix 25
AC7
B
159 192Right-handed alpha
Helix 26
AC8
B
195 219Right-handed alpha
Helix 27
AC9
B
219 224Right-handed alpha
Helix 28
AD1
B
232 245Right-handed alpha
Helix 29
AD2
B
257 260Right-handed 310
Helix 30
AD3
B
325 342Right-handed alpha
Helix 31
AD4
B
343 367Right-handed alpha
Helix 32
AD5
B
369 375Right-handed alpha
Helix 33
AD6
B
383 394Right-handed alpha
Helix 34
AD7
B
396 425Right-handed alpha
Helix 35
AD8
B
427 442Right-handed alpha
Helix 36
AD9
B
449 457Right-handed alpha
Helix 37
AE1
B
461 470Right-handed alpha
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There are 2 sheets in PDB entry 6BH8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
226 228first strand
Strand 2
A
252 255anti-parallel
Strand 3
A
277 280parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
226 228first strand
Strand 2
B
252 255anti-parallel
Strand 3
B
277 280parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il