Analysis of interatomic Contacts of Structural Units in PDB entry:
6BHK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BHK entry

There are 4 chains in PDB entry 6BHK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 34	ILE 168
A	VAL 170	ARG 354
G	ASP 35	ILE 168
G	VAL 170	LEU 321

There are 90 helices in PDB entry 6BHK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	49	Right-handed 310
Helix 2	AA2	A	64	69	Right-handed alpha
Helix 3	AA3	A	70	74	Right-handed 310
Helix 4	AA4	A	75	93	Right-handed alpha
Helix 5	AA5	A	103	107	Right-handed 310
Helix 6	AA6	A	109	121	Right-handed alpha
Helix 7	AA7	A	135	140	Right-handed alpha
Helix 8	AA8	A	142	156	Right-handed alpha
Helix 9	AA9	A	177	195	Right-handed alpha
Helix 10	AB1	A	208	219	Right-handed alpha
Helix 11	AB2	A	222	224	Right-handed 310
Helix 12	AB3	A	230	234	Right-handed 310
Helix 13	AB4	A	236	246	Right-handed alpha
Helix 14	AB5	A	254	258	Right-handed 310
Helix 15	AB6	A	267	281	Right-handed alpha
Helix 16	AB7	A	283	285	Right-handed 310
Helix 17	AB8	A	303	312	Right-handed alpha
Helix 18	AB9	A	314	316	Right-handed 310
Helix 19	AC1	A	317	322	Right-handed alpha
Helix 20	AC2	A	322	330	Right-handed alpha
Helix 21	AC3	A	333	342	Right-handed alpha
Helix 22	AC4	A	342	350	Right-handed alpha
Helix 23	AC5	G	45	49	Right-handed 310
Helix 24	AC6	G	64	69	Right-handed alpha
Helix 25	AC7	G	70	74	Right-handed 310
Helix 26	AC8	G	75	93	Right-handed alpha
Helix 27	AC9	G	103	107	Right-handed 310
Helix 28	AD1	G	109	121	Right-handed alpha
Helix 29	AD2	G	135	140	Right-handed alpha
Helix 30	AD3	G	142	156	Right-handed alpha
Helix 31	AD4	G	177	195	Right-handed alpha
Helix 32	AD5	G	204	206	Right-handed 310
Helix 33	AD6	G	208	219	Right-handed alpha
Helix 34	AD7	G	222	224	Right-handed 310
Helix 35	AD8	G	230	234	Right-handed 310
Helix 36	AD9	G	236	246	Right-handed alpha
Helix 37	AE1	G	254	258	Right-handed 310
Helix 38	AE2	G	267	281	Right-handed alpha
Helix 39	AE3	G	283	285	Right-handed 310
Helix 40	AE4	G	303	312	Right-handed alpha
Helix 41	AE5	G	314	316	Right-handed 310
Helix 42	AE6	G	317	322	Right-handed alpha
Helix 43	AE7	G	322	330	Right-handed alpha
Helix 44	AE8	G	333	342	Right-handed alpha
Helix 45	AE9	G	342	350	Right-handed alpha
Helix 46	AF1	B	47	49	Right-handed 310
Helix 47	AF2	B	64	69	Right-handed alpha
Helix 48	AF3	B	70	74	Right-handed 310
Helix 49	AF4	B	75	93	Right-handed alpha
Helix 50	AF5	B	103	107	Right-handed 310
Helix 51	AF6	B	109	121	Right-handed alpha
Helix 52	AF7	B	135	140	Right-handed alpha
Helix 53	AF8	B	142	156	Right-handed alpha
Helix 54	AF9	B	177	195	Right-handed alpha
Helix 55	AG1	B	207	219	Right-handed alpha
Helix 56	AG2	B	222	224	Right-handed 310
Helix 57	AG3	B	230	234	Right-handed 310
Helix 58	AG4	B	236	246	Right-handed alpha
Helix 59	AG5	B	254	258	Right-handed 310
Helix 60	AG6	B	267	281	Right-handed alpha
Helix 61	AG7	B	283	285	Right-handed 310
Helix 62	AG8	B	303	312	Right-handed alpha
Helix 63	AG9	B	314	316	Right-handed 310
Helix 64	AH1	B	317	322	Right-handed alpha
Helix 65	AH2	B	322	330	Right-handed alpha
Helix 66	AH3	B	333	342	Right-handed alpha
Helix 67	AH4	B	342	350	Right-handed alpha
Helix 68	AH5	E	45	50	Right-handed alpha
Helix 69	AH6	E	64	69	Right-handed alpha
Helix 70	AH7	E	70	74	Right-handed 310
Helix 71	AH8	E	75	93	Right-handed alpha
Helix 72	AH9	E	103	107	Right-handed 310
Helix 73	AI1	E	109	121	Right-handed alpha
Helix 74	AI2	E	135	140	Right-handed alpha
Helix 75	AI3	E	142	156	Right-handed alpha
Helix 76	AI4	E	177	195	Right-handed alpha
Helix 77	AI5	E	204	206	Right-handed 310
Helix 78	AI6	E	208	219	Right-handed alpha
Helix 79	AI7	E	222	224	Right-handed 310
Helix 80	AI8	E	230	234	Right-handed 310
Helix 81	AI9	E	236	246	Right-handed alpha
Helix 82	AJ1	E	254	258	Right-handed 310
Helix 83	AJ2	E	267	281	Right-handed alpha
Helix 84	AJ3	E	283	285	Right-handed 310
Helix 85	AJ4	E	303	312	Right-handed alpha
Helix 86	AJ5	E	314	316	Right-handed 310
Helix 87	AJ6	E	317	322	Right-handed alpha
Helix 88	AJ7	E	322	330	Right-handed alpha
Helix 89	AJ8	E	333	342	Right-handed alpha
Helix 90	AJ9	E	342	350	Right-handed alpha

There are 16 sheets in PDB entry 6BHK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	39	first strand
Strand 2	A	42	45	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	56	first strand
Strand 2	A	97	100	parallel
Strand 3	A	123	125	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	A	296	297	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	130	first strand
Strand 2	A	167	172	parallel
Strand 3	A	198	202	parallel
Strand 4	A	226	229	parallel
Strand 5	A	249	252	parallel
Strand 6	A	287	289	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	37	39	first strand
Strand 2	G	42	44	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	56	first strand
Strand 2	G	97	100	parallel
Strand 3	G	123	125	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	60	first strand
Strand 2	G	296	297	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	127	130	first strand
Strand 2	G	167	172	parallel
Strand 3	G	198	202	parallel
Strand 4	G	226	228	parallel
Strand 5	G	249	252	parallel
Strand 6	G	287	289	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	39	first strand
Strand 2	B	42	45	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	56	first strand
Strand 2	B	97	100	parallel
Strand 3	B	123	125	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	60	first strand
Strand 2	B	296	297	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	130	first strand
Strand 2	B	167	173	parallel
Strand 3	B	198	203	parallel
Strand 4	B	226	229	parallel
Strand 5	B	249	252	parallel
Strand 6	B	287	289	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	39	first strand
Strand 2	E	42	44	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	56	first strand
Strand 2	E	97	100	parallel
Strand 3	E	123	125	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	60	first strand
Strand 2	E	296	297	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	127	130	first strand
Strand 2	E	167	172	parallel
Strand 3	E	198	202	parallel
Strand 4	E	226	228	parallel
Strand 5	E	249	252	parallel
Strand 6	E	287	289	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BHK

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BHK