Analysis of interatomic Contacts of Structural Units in PDB entry:
6BIH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BIH entry

There are 2 chains in PDB entry 6BIH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	SER 2	VAL 780
C	ASP 1	PHE 375

There are 52 helices in PDB entry 6BIH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	7	12	Right-handed alpha
Helix 2	AA2	H	73	75	Right-handed 310
Helix 3	AA3	H	80	84	Right-handed 310
Helix 4	AA4	H	88	92	Right-handed 310
Helix 5	AA5	H	96	110	Right-handed alpha
Helix 6	AA6	H	134	142	Right-handed alpha
Helix 7	AA7	H	145	149	Right-handed 310
Helix 8	AA8	H	152	166	Right-handed alpha
Helix 9	AA9	H	182	198	Right-handed alpha
Helix 10	AB1	H	220	234	Right-handed alpha
Helix 11	AB2	H	273	278	Right-handed 310
Helix 12	AB3	H	288	297	Right-handed alpha
Helix 13	AB4	H	298	306	Right-handed alpha
Helix 14	AB5	H	309	313	Right-handed 310
Helix 15	AB6	H	327	343	Right-handed alpha
Helix 16	AB7	H	345	364	Right-handed alpha
Helix 17	AB8	H	381	392	Right-handed alpha
Helix 18	AB9	H	394	404	Right-handed alpha
Helix 19	AC1	H	419	451	Right-handed alpha
Helix 20	AC2	H	476	508	Right-handed alpha
Helix 21	AC3	H	516	520	Right-handed 310
Helix 22	AC4	H	521	530	Right-handed alpha
Helix 23	AC5	H	536	545	Right-handed alpha
Helix 24	AC6	H	551	563	Right-handed alpha
Helix 25	AC7	H	564	566	Right-handed 310
Helix 26	AC8	H	575	579	Right-handed 310
Helix 27	AC9	H	596	600	Right-handed 310
Helix 28	AD1	H	606	615	Right-handed alpha
Helix 29	AD2	H	618	625	Right-handed alpha
Helix 30	AD3	H	658	676	Right-handed alpha
Helix 31	AD4	H	697	708	Right-handed alpha
Helix 32	AD5	H	709	719	Right-handed alpha
Helix 33	AD6	H	727	735	Right-handed alpha
Helix 34	AD7	H	748	761	Right-handed alpha
Helix 35	AD8	C	55	61	Right-handed alpha
Helix 36	AD9	C	78	91	Right-handed alpha
Helix 37	AE1	C	112	124	Right-handed alpha
Helix 38	AE2	C	137	145	Right-handed alpha
Helix 39	AE3	C	181	197	Right-handed alpha
Helix 40	AE4	C	202	217	Right-handed alpha
Helix 41	AE5	C	222	230	Right-handed alpha
Helix 42	AE6	C	251	255	Right-handed 310
Helix 43	AE7	C	256	263	Right-handed alpha
Helix 44	AE8	C	264	267	Right-handed 310
Helix 45	AE9	C	273	283	Right-handed alpha
Helix 46	AF1	C	286	296	Right-handed alpha
Helix 47	AF2	C	301	305	Right-handed 310
Helix 48	AF3	C	308	320	Right-handed alpha
Helix 49	AF4	C	337	349	Right-handed alpha
Helix 50	AF5	C	350	355	Right-handed 310
Helix 51	AF6	C	359	366	Right-handed alpha
Helix 52	AF7	C	368	374	Right-handed alpha

There are 11 sheets in PDB entry 6BIH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	34	35	first strand
Strand 2	H	47	53	anti-parallel
Strand 3	H	56	61	anti-parallel
Strand 4	H	66	71	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	114	117	first strand
Strand 2	H	120	124	anti-parallel
Strand 3	H	678	685	parallel
Strand 4	H	171	177	parallel
Strand 5	H	459	467	parallel
Strand 6	H	249	257	anti-parallel
Strand 7	H	261	270	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	236	237	first strand
Strand 2	H	245	246	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	406	408	first strand
Strand 2	H	413	415	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	569	570	first strand
Strand 2	H	581	585	anti-parallel
Strand 3	H	588	592	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	725	726	first strand
Strand 2	H	773	776	anti-parallel
Strand 3	H	767	769	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	17	21	anti-parallel
Strand 3	C	8	11	anti-parallel
Strand 4	C	103	107	parallel
Strand 5	C	131	136	parallel
Strand 6	C	357	358	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	54	first strand
Strand 2	C	35	38	anti-parallel
Strand 3	C	65	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	72	first strand
Strand 2	C	75	76	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	178	first strand
Strand 2	C	160	162	anti-parallel
Strand 3	C	152	154	anti-parallel
Strand 4	C	297	300	parallel
Strand 5	C	329	330	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	241	first strand
Strand 2	C	247	250	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BIH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BIH