Analysis of interatomic Contacts of Structural Units in PDB entry:
6BK5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BK5 entry

There is 1 chain in PDB entry 6BK5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 27TYR 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6BK5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 55Right-handed alpha
Helix 2
AA2
A
68 87Right-handed alpha
Helix 3
AA3
A
88 93Right-handed alpha
Helix 4
AA4
A
95 118Right-handed alpha
Helix 5
AA5
A
119 124Right-handed alpha
Helix 6
AA6
A
128 152Right-handed alpha
Helix 7
AA7
A
153 156Right-handed 310
Helix 8
AA8
A
165 177Right-handed alpha
Helix 9
AA9
A
184 196Right-handed alpha
Helix 10
AB1
A
198 200Right-handed 310
Helix 11
AB2
A
201 210Right-handed alpha
Helix 12
AB3
A
219 230Right-handed alpha
Helix 13
AB4
A
231 233Right-handed 310
Helix 14
AB5
A
234 245Right-handed alpha
Helix 15
AB6
A
254 264Right-handed alpha
Helix 16
AB7
A
304 315Right-handed alpha
Helix 17
AB8
A
329 344Right-handed alpha
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There are 3 sheets in PDB entry 6BK5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 183first strand
Strand 2
A
216 218anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
271 276parallel
Strand 3
A
284 289anti-parallel
Strand 4
A
295 298anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 252first strand
Strand 2
A
271 276parallel
Strand 3
A
320 321parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il