Analysis of interatomic Contacts of Structural Units in PDB entry:
6BK6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BK6 entry

There are 2 chains in PDB entry 6BK6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 45TYR 254
A
 LYS 256GLY 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6BK6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 57Right-handed 310
Helix 2
AA2
A
102 112Right-handed alpha
Helix 3
AA3
A
138 140Right-handed 310
Helix 4
AA4
A
141 147Right-handed alpha
Helix 5
AA5
A
153 157Right-handed alpha
Helix 6
AA6
A
159 163Right-handed 310
Helix 7
AA7
A
190 195Right-handed alpha
Helix 8
AA8
A
251 261Right-handed alpha
Helix 9
AA9
A
270 273Right-handed 310
Helix 10
AB1
A
285 292Right-handed alpha
Helix 11
AB2
A
302 306Right-handed alpha
Helix 12
AB3
A
306 312Right-handed alpha
Helix 13
AB4
A
332 336Right-handed 310
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There are 4 sheets in PDB entry 6BK6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
169 181parallel
Strand 3
A
62 73anti-parallel
Strand 4
A
86 98anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 121first strand
Strand 2
A
125 132anti-parallel
Strand 3
A
149 152anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 243first strand
Strand 2
A
201 211anti-parallel
Strand 3
A
319 329anti-parallel
Strand 4
A
341 343anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 301first strand
Strand 2
A
275 280anti-parallel
Strand 3
A
264 269anti-parallel
Strand 4
A
348 349parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il