Analysis of interatomic Contacts of Structural Units in PDB entry:
6BLG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BLG entry

There are 2 chains in PDB entry 6BLG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 180
A
 ASN 182SER 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6BLG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 24Right-handed alpha
Helix 2
AA2
A
30 45Right-handed alpha
Helix 3
AA3
A
54 66Right-handed alpha
Helix 4
AA4
A
81 90Right-handed alpha
Helix 5
AA5
A
108 116Right-handed 310
Helix 6
AA6
A
127 131Right-handed 310
Helix 7
AA7
A
134 146Right-handed alpha
Helix 8
AA8
A
196 198Right-handed 310
Helix 9
AA9
A
199 208Right-handed alpha
Helix 10
AB1
A
212 218Right-handed alpha
Helix 11
AB2
A
236 249Right-handed alpha
Helix 12
AB3
A
249 274Right-handed alpha
Helix 13
AB4
A
299 313Right-handed alpha
Helix 14
AB5
A
327 333Right-handed alpha
Helix 15
AB6
A
342 348Right-handed alpha
Helix 16
AB7
A
360 376Right-handed alpha
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There are 3 sheets in PDB entry 6BLG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
190 194anti-parallel
Strand 3
A
172 176anti-parallel
Strand 4
A
148 152parallel
Strand 5
A
120 123parallel
Strand 6
A
73 77parallel
Strand 7
A
94 98parallel
Strand 8
A
334 336parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 165first strand
Strand 2
A
160 161anti-parallel
Strand 3
A
286 287anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
350 352anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il