Analysis of interatomic Contacts of Structural Units in PDB entry:
6BLJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BLJ entry

There are 3 chains in PDB entry 6BLJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2ASN 477
B
 HIS -2ASN 477
C
 HIS -2SER 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 6BLJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 12Right-handed 310
Helix 2
AA2
A
14 25Right-handed alpha
Helix 3
AA3
A
29 69Right-handed alpha
Helix 4
AA4
A
80 86Right-handed alpha
Helix 5
AA5
A
87 91Right-handed 310
Helix 6
AA6
A
92 98Right-handed alpha
Helix 7
AA7
A
100 104Right-handed 310
Helix 8
AA8
A
105 120Right-handed alpha
Helix 9
AA9
A
120 140Right-handed alpha
Helix 10
AB1
A
155 159Right-handed 310
Helix 11
AB2
A
182 190Right-handed alpha
Helix 12
AB3
A
195 203Right-handed alpha
Helix 13
AB4
A
211 231Right-handed alpha
Helix 14
AB5
A
244 249Right-handed alpha
Helix 15
AB6
A
254 259Right-handed alpha
Helix 16
AB7
A
276 283Right-handed alpha
Helix 17
AB8
A
290 294Right-handed 310
Helix 18
AB9
A
308 312Right-handed 310
Helix 19
AC1
A
339 359Right-handed alpha
Helix 20
AC2
A
369 373Right-handed 310
Helix 21
AC3
A
407 414Right-handed alpha
Helix 22
AC4
A
440 451Right-handed alpha
Helix 23
AC5
A
460 468Right-handed 310
Helix 24
AC6
B
3 12Right-handed 310
Helix 25
AC7
B
14 25Right-handed alpha
Helix 26
AC8
B
29 62Right-handed alpha
Helix 27
AC9
B
110 120Right-handed alpha
Helix 28
AD1
B
120 140Right-handed alpha
Helix 29
AD2
B
155 159Right-handed 310
Helix 30
AD3
B
182 190Right-handed alpha
Helix 31
AD4
B
195 203Right-handed alpha
Helix 32
AD5
B
211 231Right-handed alpha
Helix 33
AD6
B
244 251Right-handed alpha
Helix 34
AD7
B
252 259Right-handed alpha
Helix 35
AD8
B
276 283Right-handed alpha
Helix 36
AD9
B
290 294Right-handed 310
Helix 37
AE1
B
308 312Right-handed 310
Helix 38
AE2
B
339 359Right-handed alpha
Helix 39
AE3
B
369 373Right-handed 310
Helix 40
AE4
B
407 414Right-handed alpha
Helix 41
AE5
B
423 427Right-handed 310
Helix 42
AE6
B
440 451Right-handed alpha
Helix 43
AE7
B
460 468Right-handed 310
Helix 44
AE8
C
3 12Right-handed 310
Helix 45
AE9
C
14 25Right-handed alpha
Helix 46
AF1
C
29 62Right-handed alpha
Helix 47
AF2
C
109 120Right-handed alpha
Helix 48
AF3
C
120 140Right-handed alpha
Helix 49
AF4
C
155 159Right-handed 310
Helix 50
AF5
C
182 190Right-handed alpha
Helix 51
AF6
C
195 203Right-handed alpha
Helix 52
AF7
C
211 231Right-handed alpha
Helix 53
AF8
C
244 251Right-handed alpha
Helix 54
AF9
C
253 259Right-handed alpha
Helix 55
AG1
C
276 284Right-handed alpha
Helix 56
AG2
C
290 294Right-handed 310
Helix 57
AG3
C
308 312Right-handed 310
Helix 58
AG4
C
339 359Right-handed alpha
Helix 59
AG5
C
369 373Right-handed 310
Helix 60
AG6
C
407 414Right-handed alpha
Helix 61
AG7
C
440 452Right-handed alpha
Helix 62
AG8
C
460 468Right-handed 310
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There are 12 sheets in PDB entry 6BLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 165first strand
Strand 2
A
363 367anti-parallel
Strand 3
A
379 386anti-parallel
Strand 4
A
396 404anti-parallel
Strand 5
A
431 439anti-parallel
Strand 6
A
324 334anti-parallel
Strand 7
A
296 305anti-parallel
Strand 8
A
234 237parallel
Strand 9
C
208 210anti-parallel
Strand 10
C
193 194anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
208 210anti-parallel
Strand 3
C
234 237anti-parallel
Strand 4
C
296 305parallel
Strand 5
C
324 334anti-parallel
Strand 6
C
431 439anti-parallel
Strand 7
C
396 404anti-parallel
Strand 8
C
379 386anti-parallel
Strand 9
C
363 367anti-parallel
Strand 10
C
160 165anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 243first strand
Strand 2
A
270 272anti-parallel
Strand 3
A
262 264anti-parallel
Strand 4
C
262 264anti-parallel
Strand 5
C
270 272anti-parallel
Strand 6
C
241 243anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 289first strand
Strand 2
A
416 417parallel
Strand 3
A
428 429anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 458first strand
Strand 2
A
472 474anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 165first strand
Strand 2
B
363 367anti-parallel
Strand 3
B
379 386anti-parallel
Strand 4
B
396 404anti-parallel
Strand 5
B
431 439anti-parallel
Strand 6
B
324 334anti-parallel
Strand 7
B
296 305anti-parallel
Strand 8
B
234 237parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
208 209anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 243first strand
Strand 2
B
270 272anti-parallel
Strand 3
B
262 263anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 289first strand
Strand 2
B
416 417parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 453first strand
Strand 2
B
456 458anti-parallel
Strand 3
B
472 474anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 289first strand
Strand 2
C
416 417parallel
Strand 3
C
428 429anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
456 458first strand
Strand 2
C
472 474anti-parallel
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