Analysis of interatomic Contacts of Structural Units in PDB entry:
6BLQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BLQ entry

There are 2 chains in PDB entry 6BLQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU -3PRO 180
B
 HIS -28ALA 191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 6BLQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 50Right-handed 310
Helix 2
AA2
A
56 77Right-handed alpha
Helix 3
AA3
B
53 55Right-handed 310
Helix 4
AA4
B
56 67Right-handed alpha
Helix 5
AA5
B
67 78Right-handed alpha
Helix 6
AA6
B
78 86Right-handed alpha
Helix 7
AA7
B
90 94Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 6BLQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 43first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
19 26anti-parallel
Strand 4
A
4 15anti-parallel
Strand 5
B
9 20anti-parallel
Strand 6
B
25 34anti-parallel
Strand 7
B
37 43anti-parallel
Strand 8
B
49 51anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
B
-26 -25parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 93first strand
Strand 2
A
103 112anti-parallel
Strand 3
A
145 153anti-parallel
Strand 4
A
132 134anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 93first strand
Strand 2
A
103 112anti-parallel
Strand 3
A
145 153anti-parallel
Strand 4
A
138 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
118 123anti-parallel
Strand 3
A
161 166anti-parallel
Strand 4
A
174 178anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
115 123anti-parallel
Strand 3
B
156 163anti-parallel
Strand 4
B
143 145anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 103first strand
Strand 2
B
115 123anti-parallel
Strand 3
B
156 163anti-parallel
Strand 4
B
149 150anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 139first strand
Strand 2
B
129 134anti-parallel
Strand 3
B
171 177anti-parallel
Strand 4
B
185 190anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il