Analysis of interatomic Contacts of Structural Units in PDB entry:
6BMI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BMI entry

There are 3 chains in PDB entry 6BMI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 9GLU 416
B
 GLU 9GLU 416
C
 GLU 9GLU 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6BMI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 33Right-handed alpha
Helix 2
AA2
A
35 43Right-handed alpha
Helix 3
AA3
A
43 73Right-handed alpha
Helix 4
AA4
A
74 107Right-handed alpha
Helix 5
AA5
A
129 136Right-handed alpha
Helix 6
AA6
A
141 148Right-handed alpha
Helix 7
AA7
A
150 169Right-handed alpha
Helix 8
AA8
A
173 221Right-handed alpha
Helix 9
AA9
A
226 245Right-handed alpha
Helix 10
AB1
A
246 254Right-handed alpha
Helix 11
AB2
A
257 276Right-handed alpha
Helix 12
AB3
A
281 292Right-handed alpha
Helix 13
AB4
A
295 310Right-handed alpha
Helix 14
AB5
A
311 330Right-handed alpha
Helix 15
AB6
A
334 348Right-handed alpha
Helix 16
AB7
A
362 367Right-handed alpha
Helix 17
AB8
A
376 387Right-handed alpha
Helix 18
AB9
A
389 415Right-handed alpha
Helix 19
AC1
B
11 33Right-handed alpha
Helix 20
AC2
B
35 43Right-handed alpha
Helix 21
AC3
B
43 73Right-handed alpha
Helix 22
AC4
B
74 107Right-handed alpha
Helix 23
AC5
B
129 136Right-handed alpha
Helix 24
AC6
B
141 148Right-handed alpha
Helix 25
AC7
B
150 169Right-handed alpha
Helix 26
AC8
B
173 221Right-handed alpha
Helix 27
AC9
B
226 245Right-handed alpha
Helix 28
AD1
B
246 254Right-handed alpha
Helix 29
AD2
B
257 276Right-handed alpha
Helix 30
AD3
B
281 292Right-handed alpha
Helix 31
AD4
B
295 310Right-handed alpha
Helix 32
AD5
B
311 330Right-handed alpha
Helix 33
AD6
B
334 347Right-handed alpha
Helix 34
AD7
B
362 367Right-handed alpha
Helix 35
AD8
B
376 387Right-handed alpha
Helix 36
AD9
B
389 415Right-handed alpha
Helix 37
AE1
C
11 33Right-handed alpha
Helix 38
AE2
C
35 43Right-handed alpha
Helix 39
AE3
C
43 73Right-handed alpha
Helix 40
AE4
C
74 107Right-handed alpha
Helix 41
AE5
C
129 136Right-handed alpha
Helix 42
AE6
C
141 148Right-handed alpha
Helix 43
AE7
C
150 169Right-handed alpha
Helix 44
AE8
C
173 221Right-handed alpha
Helix 45
AE9
C
226 245Right-handed alpha
Helix 46
AF1
C
246 254Right-handed alpha
Helix 47
AF2
C
257 276Right-handed alpha
Helix 48
AF3
C
281 292Right-handed alpha
Helix 49
AF4
C
295 310Right-handed alpha
Helix 50
AF5
C
311 330Right-handed alpha
Helix 51
AF6
C
334 350Right-handed alpha
Helix 52
AF7
C
362 367Right-handed alpha
Helix 53
AF8
C
376 387Right-handed alpha
Helix 54
AF9
C
389 415Right-handed alpha
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There are no sheets in PDB entry 6BMI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il