Analysis of interatomic Contacts of Structural Units in PDB entry:
6BNG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BNG entry

There are 2 chains in PDB entry 6BNG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3HIS 285
B
 LYS 5HIS 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6BNG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 53Right-handed alpha
Helix 2
AA2
A
77 93Right-handed alpha
Helix 3
AA3
A
102 104Right-handed 310
Helix 4
AA4
A
105 113Right-handed alpha
Helix 5
AA5
A
119 123Right-handed 310
Helix 6
AA6
A
125 135Right-handed alpha
Helix 7
AA7
A
148 150Right-handed 310
Helix 8
AA8
A
151 162Right-handed alpha
Helix 9
AA9
A
185 193Right-handed alpha
Helix 10
AB1
A
202 206Right-handed alpha
Helix 11
AB2
A
218 221Right-handed 310
Helix 12
AB3
A
222 232Right-handed alpha
Helix 13
AB4
A
245 249Right-handed 310
Helix 14
AB5
A
252 256Right-handed 310
Helix 15
AB6
A
261 278Right-handed alpha
Helix 16
AB7
B
34 53Right-handed alpha
Helix 17
AB8
B
76 93Right-handed alpha
Helix 18
AB9
B
102 104Right-handed 310
Helix 19
AC1
B
105 113Right-handed alpha
Helix 20
AC2
B
119 123Right-handed 310
Helix 21
AC3
B
125 135Right-handed alpha
Helix 22
AC4
B
148 150Right-handed 310
Helix 23
AC5
B
151 162Right-handed alpha
Helix 24
AC6
B
186 193Right-handed alpha
Helix 25
AC7
B
202 206Right-handed alpha
Helix 26
AC8
B
219 221Right-handed 310
Helix 27
AC9
B
222 233Right-handed alpha
Helix 28
AD1
B
252 256Right-handed 310
Helix 29
AD2
B
261 278Right-handed alpha
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There are 6 sheets in PDB entry 6BNG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
15 17anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
237 243parallel
Strand 3
A
198 201parallel
Strand 4
A
167 171parallel
Strand 5
A
138 142parallel
Strand 6
A
115 118parallel
Strand 7
A
96 99parallel
Strand 8
A
56 61parallel
Strand 9
A
24 31parallel
Strand 10
A
237 243parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
181 182anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
15 17anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
237 243parallel
Strand 3
B
198 201parallel
Strand 4
B
167 171parallel
Strand 5
B
138 142parallel
Strand 6
B
115 118parallel
Strand 7
B
96 99parallel
Strand 8
B
56 61parallel
Strand 9
B
24 31parallel
Strand 10
B
237 243parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 175first strand
Strand 2
B
181 182anti-parallel
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