Analysis of interatomic Contacts of Structural Units in PDB entry:
6BO4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BO4 entry

There are 4 chains in PDB entry 6BO4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 75	GLU 701
D	PHE 75	GLU 701
B	PHE 75	GLU 701
C	PHE 75	GLU 701

There are104 helices in PDB entry 6BO4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	76	87	Right-handed alpha
Helix 2	AA2	A	94	99	Right-handed alpha
Helix 3	AA3	A	119	127	Right-handed alpha
Helix 4	AA4	A	137	146	Right-handed alpha
Helix 5	AA5	A	148	154	Right-handed alpha
Helix 6	AA6	A	166	174	Right-handed alpha
Helix 7	AA7	A	177	185	Right-handed alpha
Helix 8	AA8	A	212	220	Right-handed alpha
Helix 9	AA9	A	222	232	Right-handed alpha
Helix 10	AB1	A	248	257	Right-handed alpha
Helix 11	AB2	A	260	275	Right-handed alpha
Helix 12	AB3	A	297	303	Right-handed alpha
Helix 13	AB4	A	307	317	Right-handed alpha
Helix 14	AB5	A	323	327	Right-handed 310
Helix 15	AB6	A	355	361	Right-handed alpha
Helix 16	AB7	A	369	374	Right-handed 310
Helix 17	AB8	A	375	389	Right-handed alpha
Helix 18	AB9	A	392	413	Right-handed alpha
Helix 19	AC1	A	428	460	Right-handed alpha
Helix 20	AC2	A	470	493	Right-handed alpha
Helix 21	AC3	A	496	511	Right-handed alpha
Helix 22	AC4	A	512	517	Right-handed 310
Helix 23	AC5	A	519	558	Right-handed alpha
Helix 24	AC6	A	594	604	Right-handed alpha
Helix 25	AC7	A	619	635	Right-handed alpha
Helix 26	AC8	A	637	675	Right-handed alpha
Helix 27	AC9	D	76	87	Right-handed alpha
Helix 28	AD1	D	94	99	Right-handed alpha
Helix 29	AD2	D	119	127	Right-handed alpha
Helix 30	AD3	D	137	146	Right-handed alpha
Helix 31	AD4	D	148	154	Right-handed alpha
Helix 32	AD5	D	166	174	Right-handed alpha
Helix 33	AD6	D	177	185	Right-handed alpha
Helix 34	AD7	D	212	220	Right-handed alpha
Helix 35	AD8	D	222	232	Right-handed alpha
Helix 36	AD9	D	248	257	Right-handed alpha
Helix 37	AE1	D	260	275	Right-handed alpha
Helix 38	AE2	D	297	303	Right-handed alpha
Helix 39	AE3	D	307	317	Right-handed alpha
Helix 40	AE4	D	323	327	Right-handed 310
Helix 41	AE5	D	355	361	Right-handed alpha
Helix 42	AE6	D	369	374	Right-handed 310
Helix 43	AE7	D	375	389	Right-handed alpha
Helix 44	AE8	D	392	413	Right-handed alpha
Helix 45	AE9	D	428	460	Right-handed alpha
Helix 46	AF1	D	470	493	Right-handed alpha
Helix 47	AF2	D	496	511	Right-handed alpha
Helix 48	AF3	D	512	517	Right-handed 310
Helix 49	AF4	D	519	558	Right-handed alpha
Helix 50	AF5	D	594	604	Right-handed alpha
Helix 51	AF6	D	619	635	Right-handed alpha
Helix 52	AF7	D	637	675	Right-handed alpha
Helix 53	AF8	B	76	87	Right-handed alpha
Helix 54	AF9	B	94	99	Right-handed alpha
Helix 55	AG1	B	119	127	Right-handed alpha
Helix 56	AG2	B	137	146	Right-handed alpha
Helix 57	AG3	B	148	154	Right-handed alpha
Helix 58	AG4	B	166	174	Right-handed alpha
Helix 59	AG5	B	177	185	Right-handed alpha
Helix 60	AG6	B	212	220	Right-handed alpha
Helix 61	AG7	B	222	232	Right-handed alpha
Helix 62	AG8	B	248	257	Right-handed alpha
Helix 63	AG9	B	260	275	Right-handed alpha
Helix 64	AH1	B	297	303	Right-handed alpha
Helix 65	AH2	B	307	317	Right-handed alpha
Helix 66	AH3	B	323	327	Right-handed 310
Helix 67	AH4	B	355	361	Right-handed alpha
Helix 68	AH5	B	369	374	Right-handed 310
Helix 69	AH6	B	375	389	Right-handed alpha
Helix 70	AH7	B	392	413	Right-handed alpha
Helix 71	AH8	B	428	460	Right-handed alpha
Helix 72	AH9	B	470	493	Right-handed alpha
Helix 73	AI1	B	496	511	Right-handed alpha
Helix 74	AI2	B	512	517	Right-handed 310
Helix 75	AI3	B	519	558	Right-handed alpha
Helix 76	AI4	B	594	604	Right-handed alpha
Helix 77	AI5	B	619	635	Right-handed alpha
Helix 78	AI6	B	637	675	Right-handed alpha
Helix 79	AI7	C	76	87	Right-handed alpha
Helix 80	AI8	C	94	99	Right-handed alpha
Helix 81	AI9	C	119	127	Right-handed alpha
Helix 82	AJ1	C	137	146	Right-handed alpha
Helix 83	AJ2	C	148	154	Right-handed alpha
Helix 84	AJ3	C	166	174	Right-handed alpha
Helix 85	AJ4	C	177	185	Right-handed alpha
Helix 86	AJ5	C	212	220	Right-handed alpha
Helix 87	AJ6	C	222	232	Right-handed alpha
Helix 88	AJ7	C	248	257	Right-handed alpha
Helix 89	AJ8	C	260	275	Right-handed alpha
Helix 90	AJ9	C	297	303	Right-handed alpha
Helix 91	AK1	C	307	317	Right-handed alpha
Helix 92	AK2	C	323	327	Right-handed 310
Helix 93	AK3	C	355	361	Right-handed alpha
Helix 94	AK4	C	369	374	Right-handed 310
Helix 95	AK5	C	375	389	Right-handed alpha
Helix 96	AK6	C	392	413	Right-handed alpha
Helix 97	AK7	C	428	460	Right-handed alpha
Helix 98	AK8	C	470	493	Right-handed alpha
Helix 99	AK9	C	496	511	Right-handed alpha
Helix 100	AL1	C	512	517	Right-handed 310
Helix 101	AL2	C	519	558	Right-handed alpha
Helix 102	AL3	C	594	604	Right-handed alpha
Helix 103	AL4	C	619	635	Right-handed alpha
Helix 104	AL5	C	637	675	Right-handed alpha

There are 8 sheets in PDB entry 6BO4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	158	first strand
Strand 2	A	163	165	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	342	first strand
Strand 2	A	686	689	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	158	first strand
Strand 2	D	163	165	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	342	first strand
Strand 2	D	686	689	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	158	first strand
Strand 2	B	163	165	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	342	first strand
Strand 2	B	686	689	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	158	first strand
Strand 2	C	163	165	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	342	first strand
Strand 2	C	686	689	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BO4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BO4