Analysis of interatomic Contacts of Structural Units in PDB entry:
6BO8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BO8 entry

There are 4 chains in PDB entry 6BO8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 28	ASP 638
B	SER 28	ASP 638
C	SER 28	ASP 638
D	SER 28	ASP 638

There are116 helices in PDB entry 6BO8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	47	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	57	66	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	119	127	Right-handed alpha
Helix 7	AA7	A	131	139	Right-handed alpha
Helix 8	AA8	A	165	173	Right-handed alpha
Helix 9	AA9	A	175	184	Right-handed alpha
Helix 10	AB1	A	198	205	Right-handed alpha
Helix 11	AB2	A	209	222	Right-handed alpha
Helix 12	AB3	A	242	250	Right-handed alpha
Helix 13	AB4	A	252	264	Right-handed alpha
Helix 14	AB5	A	291	299	Right-handed alpha
Helix 15	AB6	A	301	309	Right-handed 310
Helix 16	AB7	A	310	323	Right-handed alpha
Helix 17	AB8	A	325	346	Right-handed alpha
Helix 18	AB9	A	380	403	Right-handed alpha
Helix 19	AC1	A	425	445	Right-handed alpha
Helix 20	AC2	A	450	464	Right-handed alpha
Helix 21	AC3	A	465	472	Right-handed 310
Helix 22	AC4	A	477	487	Right-handed alpha
Helix 23	AC5	A	489	492	Right-handed 310
Helix 24	AC6	A	493	512	Right-handed alpha
Helix 25	AC7	A	520	524	Right-handed 310
Helix 26	AC8	A	525	538	Right-handed alpha
Helix 27	AC9	A	552	568	Right-handed alpha
Helix 28	AD1	A	569	587	Right-handed alpha
Helix 29	AD2	A	588	606	Right-handed alpha
Helix 30	AD3	B	29	47	Right-handed alpha
Helix 31	AD4	B	47	55	Right-handed alpha
Helix 32	AD5	B	57	66	Right-handed alpha
Helix 33	AD6	B	81	89	Right-handed alpha
Helix 34	AD7	B	91	102	Right-handed alpha
Helix 35	AD8	B	119	127	Right-handed alpha
Helix 36	AD9	B	131	139	Right-handed alpha
Helix 37	AE1	B	165	173	Right-handed alpha
Helix 38	AE2	B	175	184	Right-handed alpha
Helix 39	AE3	B	198	205	Right-handed alpha
Helix 40	AE4	B	209	222	Right-handed alpha
Helix 41	AE5	B	242	250	Right-handed alpha
Helix 42	AE6	B	252	264	Right-handed alpha
Helix 43	AE7	B	291	299	Right-handed alpha
Helix 44	AE8	B	301	309	Right-handed 310
Helix 45	AE9	B	310	323	Right-handed alpha
Helix 46	AF1	B	325	346	Right-handed alpha
Helix 47	AF2	B	380	403	Right-handed alpha
Helix 48	AF3	B	425	445	Right-handed alpha
Helix 49	AF4	B	450	464	Right-handed alpha
Helix 50	AF5	B	465	472	Right-handed 310
Helix 51	AF6	B	477	487	Right-handed alpha
Helix 52	AF7	B	489	492	Right-handed 310
Helix 53	AF8	B	493	512	Right-handed alpha
Helix 54	AF9	B	520	524	Right-handed 310
Helix 55	AG1	B	525	538	Right-handed alpha
Helix 56	AG2	B	552	568	Right-handed alpha
Helix 57	AG3	B	569	587	Right-handed alpha
Helix 58	AG4	B	588	606	Right-handed alpha
Helix 59	AG5	C	29	47	Right-handed alpha
Helix 60	AG6	C	47	55	Right-handed alpha
Helix 61	AG7	C	57	66	Right-handed alpha
Helix 62	AG8	C	81	89	Right-handed alpha
Helix 63	AG9	C	91	102	Right-handed alpha
Helix 64	AH1	C	119	127	Right-handed alpha
Helix 65	AH2	C	131	139	Right-handed alpha
Helix 66	AH3	C	165	173	Right-handed alpha
Helix 67	AH4	C	175	184	Right-handed alpha
Helix 68	AH5	C	198	205	Right-handed alpha
Helix 69	AH6	C	209	222	Right-handed alpha
Helix 70	AH7	C	242	250	Right-handed alpha
Helix 71	AH8	C	252	264	Right-handed alpha
Helix 72	AH9	C	291	299	Right-handed alpha
Helix 73	AI1	C	301	309	Right-handed 310
Helix 74	AI2	C	310	323	Right-handed alpha
Helix 75	AI3	C	325	346	Right-handed alpha
Helix 76	AI4	C	380	403	Right-handed alpha
Helix 77	AI5	C	425	445	Right-handed alpha
Helix 78	AI6	C	450	464	Right-handed alpha
Helix 79	AI7	C	465	472	Right-handed 310
Helix 80	AI8	C	477	487	Right-handed alpha
Helix 81	AI9	C	489	492	Right-handed 310
Helix 82	AJ1	C	493	512	Right-handed alpha
Helix 83	AJ2	C	520	524	Right-handed 310
Helix 84	AJ3	C	525	538	Right-handed alpha
Helix 85	AJ4	C	552	568	Right-handed alpha
Helix 86	AJ5	C	569	587	Right-handed alpha
Helix 87	AJ6	C	588	606	Right-handed alpha
Helix 88	AJ7	D	29	47	Right-handed alpha
Helix 89	AJ8	D	47	55	Right-handed alpha
Helix 90	AJ9	D	57	66	Right-handed alpha
Helix 91	AK1	D	81	89	Right-handed alpha
Helix 92	AK2	D	91	102	Right-handed alpha
Helix 93	AK3	D	119	127	Right-handed alpha
Helix 94	AK4	D	131	139	Right-handed alpha
Helix 95	AK5	D	165	173	Right-handed alpha
Helix 96	AK6	D	175	184	Right-handed alpha
Helix 97	AK7	D	198	205	Right-handed alpha
Helix 98	AK8	D	209	222	Right-handed alpha
Helix 99	AK9	D	242	250	Right-handed alpha
Helix 100	AL1	D	252	264	Right-handed alpha
Helix 101	AL2	D	291	299	Right-handed alpha
Helix 102	AL3	D	301	309	Right-handed 310
Helix 103	AL4	D	310	323	Right-handed alpha
Helix 104	AL5	D	325	346	Right-handed alpha
Helix 105	AL6	D	380	403	Right-handed alpha
Helix 106	AL7	D	425	445	Right-handed alpha
Helix 107	AL8	D	450	464	Right-handed alpha
Helix 108	AL9	D	465	472	Right-handed 310
Helix 109	AM1	D	477	487	Right-handed alpha
Helix 110	AM2	D	489	492	Right-handed 310
Helix 111	AM3	D	493	512	Right-handed alpha
Helix 112	AM4	D	520	524	Right-handed 310
Helix 113	AM5	D	525	538	Right-handed alpha
Helix 114	AM6	D	552	568	Right-handed alpha
Helix 115	AM7	D	569	587	Right-handed alpha
Helix 116	AM8	D	588	606	Right-handed alpha

There are 4 sheets in PDB entry 6BO8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	269	270	first strand
Strand 2	A	273	278	anti-parallel
Strand 3	A	631	636	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	269	270	first strand
Strand 2	B	273	278	anti-parallel
Strand 3	B	631	636	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	269	270	first strand
Strand 2	C	273	278	anti-parallel
Strand 3	C	631	636	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	269	270	first strand
Strand 2	D	273	278	anti-parallel
Strand 3	D	631	636	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BO8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BO8