Analysis of interatomic Contacts of Structural Units in PDB entry:
6BPG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BPG entry

There are 3 chains in PDB entry 6BPG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	PHE 490
B	ALA 2	PHE 490
C	ALA 2	SER 330

There are157 helices in PDB entry 6BPG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	63	Right-handed alpha
Helix 2	AA2	A	64	82	Right-handed alpha
Helix 3	AA3	A	82	95	Right-handed alpha
Helix 4	AA4	A	97	102	Right-handed alpha
Helix 5	AA5	A	104	118	Right-handed alpha
Helix 6	AA6	A	119	123	Right-handed 310
Helix 7	AA7	A	154	169	Right-handed alpha
Helix 8	AA8	A	182	196	Right-handed alpha
Helix 9	AA9	A	211	219	Right-handed alpha
Helix 10	AB1	A	230	246	Right-handed alpha
Helix 11	AB2	A	266	280	Right-handed alpha
Helix 12	AB3	A	281	284	Right-handed 310
Helix 13	AB4	A	296	312	Right-handed alpha
Helix 14	AB5	A	330	347	Right-handed alpha
Helix 15	AB6	A	360	365	Right-handed 310
Helix 16	AB7	A	381	386	Right-handed alpha
Helix 17	AB8	A	400	410	Right-handed alpha
Helix 18	AB9	A	423	434	Right-handed alpha
Helix 19	AC1	A	456	458	Right-handed 310
Helix 20	AC2	A	465	472	Right-handed alpha
Helix 21	AC3	B	42	62	Right-handed alpha
Helix 22	AC4	B	64	82	Right-handed alpha
Helix 23	AC5	B	82	95	Right-handed alpha
Helix 24	AC6	B	97	102	Right-handed alpha
Helix 25	AC7	B	104	118	Right-handed alpha
Helix 26	AC8	B	119	123	Right-handed 310
Helix 27	AC9	B	154	169	Right-handed alpha
Helix 28	AD1	B	182	196	Right-handed alpha
Helix 29	AD2	B	211	219	Right-handed alpha
Helix 30	AD3	B	230	246	Right-handed alpha
Helix 31	AD4	B	266	280	Right-handed alpha
Helix 32	AD5	B	281	284	Right-handed 310
Helix 33	AD6	B	296	313	Right-handed alpha
Helix 34	AD7	B	330	347	Right-handed alpha
Helix 35	AD8	B	360	366	Right-handed 310
Helix 36	AD9	B	381	386	Right-handed alpha
Helix 37	AE1	B	400	409	Right-handed alpha
Helix 38	AE2	B	423	434	Right-handed alpha
Helix 39	AE3	B	465	472	Right-handed alpha
Helix 40	AE4	C	42	63	Right-handed alpha
Helix 41	AE5	C	64	82	Right-handed alpha
Helix 42	AE6	C	82	95	Right-handed alpha
Helix 43	AE7	C	97	102	Right-handed alpha
Helix 44	AE8	C	104	118	Right-handed alpha
Helix 45	AE9	C	119	123	Right-handed 310
Helix 46	AF1	C	154	169	Right-handed alpha
Helix 47	AF2	C	182	196	Right-handed alpha
Helix 48	AF3	C	211	219	Right-handed alpha
Helix 49	AF4	C	230	246	Right-handed alpha
Helix 50	AF5	C	266	280	Right-handed alpha
Helix 51	AF6	C	281	284	Right-handed 310
Helix 52	AF7	C	298	311	Right-handed alpha
Helix 53	AF8	C	330	347	Right-handed alpha
Helix 54	AF9	C	360	365	Right-handed 310
Helix 55	AG1	C	381	386	Right-handed alpha
Helix 56	AG2	C	400	410	Right-handed alpha
Helix 57	AG3	C	423	434	Right-handed alpha
Helix 58	AG4	C	456	458	Right-handed 310
Helix 59	AG5	C	465	472	Right-handed alpha
Helix 60	AG6	D	42	63	Right-handed alpha
Helix 61	AG7	D	64	82	Right-handed alpha
Helix 62	AG8	D	82	95	Right-handed alpha
Helix 63	AG9	D	97	102	Right-handed alpha
Helix 64	AH1	D	104	118	Right-handed alpha
Helix 65	AH2	D	119	123	Right-handed 310
Helix 66	AH3	D	154	169	Right-handed alpha
Helix 67	AH4	D	182	196	Right-handed alpha
Helix 68	AH5	D	211	219	Right-handed alpha
Helix 69	AH6	D	230	246	Right-handed alpha
Helix 70	AH7	D	266	280	Right-handed alpha
Helix 71	AH8	D	281	284	Right-handed 310
Helix 72	AH9	D	298	312	Right-handed alpha
Helix 73	AI1	D	330	347	Right-handed alpha
Helix 74	AI2	D	360	366	Right-handed 310
Helix 75	AI3	D	381	386	Right-handed alpha
Helix 76	AI4	D	400	410	Right-handed alpha
Helix 77	AI5	D	423	434	Right-handed alpha
Helix 78	AI6	D	456	458	Right-handed 310
Helix 79	AI7	D	465	472	Right-handed alpha
Helix 80	AI8	E	42	63	Right-handed alpha
Helix 81	AI9	E	64	82	Right-handed alpha
Helix 82	AJ1	E	82	95	Right-handed alpha
Helix 83	AJ2	E	97	102	Right-handed alpha
Helix 84	AJ3	E	104	118	Right-handed alpha
Helix 85	AJ4	E	119	123	Right-handed 310
Helix 86	AJ5	E	154	169	Right-handed alpha
Helix 87	AJ6	E	182	196	Right-handed alpha
Helix 88	AJ7	E	211	219	Right-handed alpha
Helix 89	AJ8	E	230	246	Right-handed alpha
Helix 90	AJ9	E	266	280	Right-handed alpha
Helix 91	AK1	E	281	284	Right-handed 310
Helix 92	AK2	E	298	312	Right-handed alpha
Helix 93	AK3	E	330	347	Right-handed alpha
Helix 94	AK4	E	360	366	Right-handed 310
Helix 95	AK5	E	381	386	Right-handed alpha
Helix 96	AK6	E	400	410	Right-handed alpha
Helix 97	AK7	E	423	434	Right-handed alpha
Helix 98	AK8	E	456	458	Right-handed 310
Helix 99	AK9	E	465	472	Right-handed alpha
Helix 100	AL1	F	42	62	Right-handed alpha
Helix 101	AL2	F	64	82	Right-handed alpha
Helix 102	AL3	F	82	95	Right-handed alpha
Helix 103	AL4	F	97	102	Right-handed alpha
Helix 104	AL5	F	106	118	Right-handed alpha
Helix 105	AL6	F	119	123	Right-handed 310
Helix 106	AL7	F	154	169	Right-handed alpha
Helix 107	AL8	F	182	195	Right-handed alpha
Helix 108	AL9	F	211	219	Right-handed alpha
Helix 109	AM1	F	230	246	Right-handed alpha
Helix 110	AM2	F	266	280	Right-handed alpha
Helix 111	AM3	F	281	284	Right-handed 310
Helix 112	AM4	F	296	312	Right-handed alpha
Helix 113	AM5	F	330	347	Right-handed alpha
Helix 114	AM6	F	360	365	Right-handed 310
Helix 115	AM7	F	381	386	Right-handed alpha
Helix 116	AM8	F	400	410	Right-handed alpha
Helix 117	AM9	F	423	434	Right-handed alpha
Helix 118	AN1	F	456	458	Right-handed 310
Helix 119	AN2	F	465	472	Right-handed alpha
Helix 120	AN3	G	42	63	Right-handed alpha
Helix 121	AN4	G	64	82	Right-handed alpha
Helix 122	AN5	G	82	95	Right-handed alpha
Helix 123	AN6	G	97	102	Right-handed alpha
Helix 124	AN7	G	104	120	Right-handed alpha
Helix 125	AN8	G	121	123	Right-handed 310
Helix 126	AN9	G	154	169	Right-handed alpha
Helix 127	AO1	G	182	196	Right-handed alpha
Helix 128	AO2	G	211	219	Right-handed alpha
Helix 129	AO3	G	230	246	Right-handed alpha
Helix 130	AO4	G	266	280	Right-handed alpha
Helix 131	AO5	G	281	284	Right-handed 310
Helix 132	AO6	G	298	312	Right-handed alpha
Helix 133	AO7	G	330	347	Right-handed alpha
Helix 134	AO8	G	360	365	Right-handed 310
Helix 135	AO9	G	381	386	Right-handed alpha
Helix 136	AP1	G	400	410	Right-handed alpha
Helix 137	AP2	G	423	434	Right-handed alpha
Helix 138	AP3	G	465	472	Right-handed alpha
Helix 139	AP4	H	42	63	Right-handed alpha
Helix 140	AP5	H	64	82	Right-handed alpha
Helix 141	AP6	H	82	95	Right-handed alpha
Helix 142	AP7	H	97	102	Right-handed alpha
Helix 143	AP8	H	106	118	Right-handed alpha
Helix 144	AP9	H	119	123	Right-handed 310
Helix 145	AQ1	H	154	169	Right-handed alpha
Helix 146	AQ2	H	182	196	Right-handed alpha
Helix 147	AQ3	H	211	219	Right-handed alpha
Helix 148	AQ4	H	230	246	Right-handed alpha
Helix 149	AQ5	H	266	280	Right-handed alpha
Helix 150	AQ6	H	281	284	Right-handed 310
Helix 151	AQ7	H	298	312	Right-handed alpha
Helix 152	AQ8	H	330	347	Right-handed alpha
Helix 153	AQ9	H	360	365	Right-handed 310
Helix 154	AR1	H	381	386	Right-handed alpha
Helix 155	AR2	H	400	410	Right-handed alpha
Helix 156	AR3	H	423	434	Right-handed alpha
Helix 157	AR4	H	465	472	Right-handed alpha

There are 29 sheets in PDB entry 6BPG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	11	first strand
Strand 2	A	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	27	first strand
Strand 2	A	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 20 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	353	first strand
Strand 2	B	372	375	anti-parallel
Strand 3	B	392	398	parallel
Strand 4	B	291	295	parallel
Strand 5	B	258	261	parallel
Strand 6	B	416	420	parallel
Strand 7	B	438	441	parallel
Strand 8	A	474	482	parallel
Strand 9	A	134	142	anti-parallel
Strand 10	A	125	131	anti-parallel
Strand 11	C	125	131	anti-parallel
Strand 12	C	134	142	anti-parallel
Strand 13	C	474	482	anti-parallel
Strand 14	D	438	441	parallel
Strand 15	D	416	420	parallel
Strand 16	D	258	261	parallel
Strand 17	D	291	295	parallel
Strand 18	D	392	398	parallel
Strand 19	D	372	375	parallel
Strand 20	D	350	353	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	202	204	first strand
Strand 2	A	172	176	parallel
Strand 3	A	145	149	parallel
Strand 4	A	222	228	parallel
Strand 5	A	248	252	parallel
Strand 6	A	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 20 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	353	first strand
Strand 2	A	372	375	anti-parallel
Strand 3	A	392	398	parallel
Strand 4	A	291	295	parallel
Strand 5	A	258	261	parallel
Strand 6	A	416	420	parallel
Strand 7	A	438	441	parallel
Strand 8	B	474	482	parallel
Strand 9	B	134	142	anti-parallel
Strand 10	B	125	131	anti-parallel
Strand 11	D	125	131	anti-parallel
Strand 12	D	134	142	anti-parallel
Strand 13	D	474	482	anti-parallel
Strand 14	C	438	441	parallel
Strand 15	C	416	420	parallel
Strand 16	C	258	261	parallel
Strand 17	C	291	295	parallel
Strand 18	C	392	398	parallel
Strand 19	C	372	377	parallel
Strand 20	C	350	353	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	11	first strand
Strand 2	B	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	27	first strand
Strand 2	B	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	202	204	first strand
Strand 2	B	172	176	parallel
Strand 3	B	145	149	parallel
Strand 4	B	224	228	parallel
Strand 5	B	248	252	parallel
Strand 6	B	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	9	11	first strand
Strand 2	C	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	27	first strand
Strand 2	C	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	202	204	first strand
Strand 2	C	172	176	parallel
Strand 3	C	145	149	parallel
Strand 4	C	224	228	parallel
Strand 5	C	248	252	parallel
Strand 6	C	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	9	11	first strand
Strand 2	D	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	27	first strand
Strand 2	D	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	202	204	first strand
Strand 2	D	172	176	parallel
Strand 3	D	145	149	parallel
Strand 4	D	224	228	parallel
Strand 5	D	248	252	parallel
Strand 6	D	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	34	39	parallel
Strand 3	E	23	27	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	11	first strand
Strand 2	E	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 19 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	350	353	first strand
Strand 2	F	372	377	anti-parallel
Strand 3	F	392	398	parallel
Strand 4	F	291	295	parallel
Strand 5	F	258	261	parallel
Strand 6	F	416	420	parallel
Strand 7	F	438	441	parallel
Strand 8	E	474	482	parallel
Strand 9	E	134	142	anti-parallel
Strand 10	E	125	131	anti-parallel
Strand 11	G	125	131	anti-parallel
Strand 12	G	134	142	anti-parallel
Strand 13	G	474	482	anti-parallel
Strand 14	H	438	441	parallel
Strand 15	H	416	420	parallel
Strand 16	H	258	261	parallel
Strand 17	H	291	295	parallel
Strand 18	H	392	398	parallel
Strand 19	H	372	375	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	202	204	first strand
Strand 2	E	172	176	parallel
Strand 3	E	145	149	parallel
Strand 4	E	222	228	parallel
Strand 5	E	248	252	parallel
Strand 6	E	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 20 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	353	first strand
Strand 2	E	372	375	anti-parallel
Strand 3	E	392	398	parallel
Strand 4	E	291	295	parallel
Strand 5	E	258	261	parallel
Strand 6	E	416	420	parallel
Strand 7	E	438	441	parallel
Strand 8	F	474	482	parallel
Strand 9	F	134	142	anti-parallel
Strand 10	F	125	131	anti-parallel
Strand 11	H	125	131	anti-parallel
Strand 12	H	134	142	anti-parallel
Strand 13	H	474	482	anti-parallel
Strand 14	G	438	441	parallel
Strand 15	G	416	420	parallel
Strand 16	G	258	261	parallel
Strand 17	G	291	295	parallel
Strand 18	G	392	398	parallel
Strand 19	G	372	375	parallel
Strand 20	G	350	353	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	9	11	first strand
Strand 2	F	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	23	27	first strand
Strand 2	F	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	202	204	first strand
Strand 2	F	172	176	parallel
Strand 3	F	145	149	parallel
Strand 4	F	224	228	parallel
Strand 5	F	248	252	parallel
Strand 6	F	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	11	first strand
Strand 2	G	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	23	27	first strand
Strand 2	G	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	202	204	first strand
Strand 2	G	172	176	parallel
Strand 3	G	145	149	parallel
Strand 4	G	224	228	parallel
Strand 5	G	248	252	parallel
Strand 6	G	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	9	11	first strand
Strand 2	H	14	16	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	27	first strand
Strand 2	H	34	39	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	202	204	first strand
Strand 2	H	172	176	parallel
Strand 3	H	145	149	parallel
Strand 4	H	222	228	parallel
Strand 5	H	248	252	parallel
Strand 6	H	460	461	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	413	414	first strand
Strand 2	H	456	457	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BPG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BPG