Analysis of interatomic Contacts of Structural Units in PDB entry:
6BPQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BPQ entry

There are 4 chains in PDB entry 6BPQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	UNK 54	UNK 1100
B	UNK 54	UNK 1100
C	UNK 54	UNK 1100
D	UNK 54	UNK 1100

There are176 helices in PDB entry 6BPQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	125	136	Right-handed alpha
Helix 2	AA2	A	158	176	Right-handed alpha
Helix 3	AA3	A	189	203	Right-handed alpha
Helix 4	AA4	A	247	254	Right-handed alpha
Helix 5	AA5	A	275	288	Right-handed alpha
Helix 6	AA6	A	292	296	Right-handed 310
Helix 7	AA7	A	309	322	Right-handed alpha
Helix 8	AA8	A	336	342	Right-handed alpha
Helix 9	AA9	A	352	362	Right-handed alpha
Helix 10	AB1	A	362	369	Right-handed alpha
Helix 11	AB2	A	370	385	Right-handed alpha
Helix 12	AB3	A	403	420	Right-handed alpha
Helix 13	AB4	A	425	436	Right-handed alpha
Helix 14	AB5	A	438	448	Right-handed alpha
Helix 15	AB6	A	458	468	Right-handed alpha
Helix 16	AB7	A	470	481	Right-handed alpha
Helix 17	AB8	A	483	488	Right-handed alpha
Helix 18	AB9	A	489	499	Right-handed alpha
Helix 19	AC1	A	502	516	Right-handed alpha
Helix 20	AC2	A	518	533	Right-handed alpha
Helix 21	AC3	A	559	571	Right-handed alpha
Helix 22	AC4	A	575	583	Right-handed alpha
Helix 23	AC5	A	586	603	Right-handed alpha
Helix 24	AC6	A	607	636	Right-handed alpha
Helix 25	AC7	A	636	645	Right-handed alpha
Helix 26	AC8	A	656	663	Right-handed alpha
Helix 27	AC9	A	665	670	Right-handed alpha
Helix 28	AD1	A	671	684	Right-handed alpha
Helix 29	AD2	A	691	701	Right-handed alpha
Helix 30	AD3	A	701	710	Right-handed alpha
Helix 31	AD4	A	722	731	Right-handed alpha
Helix 32	AD5	A	733	758	Right-handed alpha
Helix 33	AD6	A	765	789	Right-handed alpha
Helix 34	AD7	A	796	815	Right-handed alpha
Helix 35	AD8	A	823	851	Right-handed alpha
Helix 36	AD9	A	854	889	Right-handed alpha
Helix 37	AE1	A	896	910	Right-handed alpha
Helix 38	AE2	A	949	953	Right-handed 310
Helix 39	AE3	A	954	974	Right-handed alpha
Helix 40	AE4	A	991	1008	Right-handed alpha
Helix 41	AE5	A	1012	1014	Right-handed 310
Helix 42	AE6	A	1015	1025	Right-handed alpha
Helix 43	AE7	A	1046	1067	Right-handed alpha
Helix 44	AE8	A	1078	1100	Right-handed alpha
Helix 45	AE9	B	125	136	Right-handed alpha
Helix 46	AF1	B	158	176	Right-handed alpha
Helix 47	AF2	B	189	203	Right-handed alpha
Helix 48	AF3	B	247	254	Right-handed alpha
Helix 49	AF4	B	275	288	Right-handed alpha
Helix 50	AF5	B	292	296	Right-handed 310
Helix 51	AF6	B	309	322	Right-handed alpha
Helix 52	AF7	B	336	342	Right-handed alpha
Helix 53	AF8	B	352	362	Right-handed alpha
Helix 54	AF9	B	362	369	Right-handed alpha
Helix 55	AG1	B	370	385	Right-handed alpha
Helix 56	AG2	B	403	420	Right-handed alpha
Helix 57	AG3	B	425	436	Right-handed alpha
Helix 58	AG4	B	438	448	Right-handed alpha
Helix 59	AG5	B	458	468	Right-handed alpha
Helix 60	AG6	B	470	481	Right-handed alpha
Helix 61	AG7	B	483	488	Right-handed alpha
Helix 62	AG8	B	489	499	Right-handed alpha
Helix 63	AG9	B	502	516	Right-handed alpha
Helix 64	AH1	B	518	533	Right-handed alpha
Helix 65	AH2	B	559	571	Right-handed alpha
Helix 66	AH3	B	575	583	Right-handed alpha
Helix 67	AH4	B	586	603	Right-handed alpha
Helix 68	AH5	B	607	636	Right-handed alpha
Helix 69	AH6	B	636	645	Right-handed alpha
Helix 70	AH7	B	656	663	Right-handed alpha
Helix 71	AH8	B	665	670	Right-handed alpha
Helix 72	AH9	B	671	684	Right-handed alpha
Helix 73	AI1	B	691	701	Right-handed alpha
Helix 74	AI2	B	701	710	Right-handed alpha
Helix 75	AI3	B	722	731	Right-handed alpha
Helix 76	AI4	B	733	758	Right-handed alpha
Helix 77	AI5	B	765	789	Right-handed alpha
Helix 78	AI6	B	796	815	Right-handed alpha
Helix 79	AI7	B	823	851	Right-handed alpha
Helix 80	AI8	B	854	889	Right-handed alpha
Helix 81	AI9	B	896	910	Right-handed alpha
Helix 82	AJ1	B	949	953	Right-handed 310
Helix 83	AJ2	B	954	974	Right-handed alpha
Helix 84	AJ3	B	991	1008	Right-handed alpha
Helix 85	AJ4	B	1012	1014	Right-handed 310
Helix 86	AJ5	B	1015	1025	Right-handed alpha
Helix 87	AJ6	B	1046	1067	Right-handed alpha
Helix 88	AJ7	B	1078	1100	Right-handed alpha
Helix 89	AJ8	C	125	136	Right-handed alpha
Helix 90	AJ9	C	158	176	Right-handed alpha
Helix 91	AK1	C	189	203	Right-handed alpha
Helix 92	AK2	C	247	254	Right-handed alpha
Helix 93	AK3	C	275	288	Right-handed alpha
Helix 94	AK4	C	292	296	Right-handed 310
Helix 95	AK5	C	309	322	Right-handed alpha
Helix 96	AK6	C	336	342	Right-handed alpha
Helix 97	AK7	C	352	362	Right-handed alpha
Helix 98	AK8	C	362	369	Right-handed alpha
Helix 99	AK9	C	370	385	Right-handed alpha
Helix 100	AL1	C	403	420	Right-handed alpha
Helix 101	AL2	C	425	436	Right-handed alpha
Helix 102	AL3	C	438	448	Right-handed alpha
Helix 103	AL4	C	458	468	Right-handed alpha
Helix 104	AL5	C	470	481	Right-handed alpha
Helix 105	AL6	C	483	488	Right-handed alpha
Helix 106	AL7	C	489	499	Right-handed alpha
Helix 107	AL8	C	502	516	Right-handed alpha
Helix 108	AL9	C	518	533	Right-handed alpha
Helix 109	AM1	C	559	571	Right-handed alpha
Helix 110	AM2	C	575	583	Right-handed alpha
Helix 111	AM3	C	586	603	Right-handed alpha
Helix 112	AM4	C	607	636	Right-handed alpha
Helix 113	AM5	C	636	645	Right-handed alpha
Helix 114	AM6	C	656	663	Right-handed alpha
Helix 115	AM7	C	665	670	Right-handed alpha
Helix 116	AM8	C	671	684	Right-handed alpha
Helix 117	AM9	C	691	701	Right-handed alpha
Helix 118	AN1	C	701	710	Right-handed alpha
Helix 119	AN2	C	722	731	Right-handed alpha
Helix 120	AN3	C	733	758	Right-handed alpha
Helix 121	AN4	C	765	789	Right-handed alpha
Helix 122	AN5	C	796	815	Right-handed alpha
Helix 123	AN6	C	823	851	Right-handed alpha
Helix 124	AN7	C	854	889	Right-handed alpha
Helix 125	AN8	C	896	910	Right-handed alpha
Helix 126	AN9	C	949	953	Right-handed 310
Helix 127	AO1	C	954	974	Right-handed alpha
Helix 128	AO2	C	991	1008	Right-handed alpha
Helix 129	AO3	C	1012	1014	Right-handed 310
Helix 130	AO4	C	1015	1025	Right-handed alpha
Helix 131	AO5	C	1046	1067	Right-handed alpha
Helix 132	AO6	C	1078	1100	Right-handed alpha
Helix 133	AO7	D	125	136	Right-handed alpha
Helix 134	AO8	D	158	176	Right-handed alpha
Helix 135	AO9	D	189	203	Right-handed alpha
Helix 136	AP1	D	247	254	Right-handed alpha
Helix 137	AP2	D	275	288	Right-handed alpha
Helix 138	AP3	D	292	296	Right-handed 310
Helix 139	AP4	D	309	322	Right-handed alpha
Helix 140	AP5	D	336	342	Right-handed alpha
Helix 141	AP6	D	352	362	Right-handed alpha
Helix 142	AP7	D	362	369	Right-handed alpha
Helix 143	AP8	D	370	385	Right-handed alpha
Helix 144	AP9	D	403	420	Right-handed alpha
Helix 145	AQ1	D	425	436	Right-handed alpha
Helix 146	AQ2	D	438	448	Right-handed alpha
Helix 147	AQ3	D	458	468	Right-handed alpha
Helix 148	AQ4	D	470	481	Right-handed alpha
Helix 149	AQ5	D	483	488	Right-handed alpha
Helix 150	AQ6	D	489	499	Right-handed alpha
Helix 151	AQ7	D	502	516	Right-handed alpha
Helix 152	AQ8	D	518	533	Right-handed alpha
Helix 153	AQ9	D	559	571	Right-handed alpha
Helix 154	AR1	D	575	583	Right-handed alpha
Helix 155	AR2	D	586	603	Right-handed alpha
Helix 156	AR3	D	607	636	Right-handed alpha
Helix 157	AR4	D	636	645	Right-handed alpha
Helix 158	AR5	D	656	663	Right-handed alpha
Helix 159	AR6	D	665	670	Right-handed alpha
Helix 160	AR7	D	671	684	Right-handed alpha
Helix 161	AR8	D	691	701	Right-handed alpha
Helix 162	AR9	D	701	710	Right-handed alpha
Helix 163	AS1	D	722	731	Right-handed alpha
Helix 164	AS2	D	733	758	Right-handed alpha
Helix 165	AS3	D	765	789	Right-handed alpha
Helix 166	AS4	D	796	815	Right-handed alpha
Helix 167	AS5	D	823	851	Right-handed alpha
Helix 168	AS6	D	854	889	Right-handed alpha
Helix 169	AS7	D	896	910	Right-handed alpha
Helix 170	AS8	D	949	953	Right-handed 310
Helix 171	AS9	D	954	974	Right-handed alpha
Helix 172	AT1	D	991	1008	Right-handed alpha
Helix 173	AT2	D	1012	1014	Right-handed 310
Helix 174	AT3	D	1015	1025	Right-handed alpha
Helix 175	AT4	D	1046	1067	Right-handed alpha
Helix 176	AT5	D	1078	1100	Right-handed alpha

There are 12 sheets in PDB entry 6BPQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	58	first strand
Strand 2	A	106	108	parallel
Strand 3	A	116	120	parallel
Strand 4	A	259	262	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	212	first strand
Strand 2	A	178	181	parallel
Strand 3	A	144	148	parallel
Strand 4	A	301	305	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	327	330	first strand
Strand 2	A	391	394	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	58	first strand
Strand 2	B	106	108	parallel
Strand 3	B	116	120	parallel
Strand 4	B	259	262	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	212	first strand
Strand 2	B	178	181	parallel
Strand 3	B	144	148	parallel
Strand 4	B	301	305	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	330	first strand
Strand 2	B	391	394	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	58	first strand
Strand 2	C	106	108	parallel
Strand 3	C	116	120	parallel
Strand 4	C	259	262	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	212	first strand
Strand 2	C	178	181	parallel
Strand 3	C	144	148	parallel
Strand 4	C	301	305	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	327	330	first strand
Strand 2	C	391	394	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	58	first strand
Strand 2	D	106	108	parallel
Strand 3	D	116	120	parallel
Strand 4	D	259	262	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	212	first strand
Strand 2	D	178	181	parallel
Strand 3	D	144	148	parallel
Strand 4	D	301	305	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	327	330	first strand
Strand 2	D	391	394	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BPQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BPQ