Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BQ5 entry

There are 2 chains in PDB entry 6BQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 24GLU 315
B
 LYS 24GLU 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6BQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
80 96Right-handed alpha
Helix 2
AA2
A
110 118Right-handed alpha
Helix 3
AA3
A
131 142Right-handed alpha
Helix 4
AA4
A
145 150Right-handed alpha
Helix 5
AA5
A
160 167Right-handed alpha
Helix 6
AA6
A
188 192Right-handed 310
Helix 7
AA7
A
193 200Right-handed alpha
Helix 8
AA8
A
201 203Right-handed 310
Helix 9
AA9
A
221 225Right-handed 310
Helix 10
AB1
A
226 236Right-handed alpha
Helix 11
AB2
A
249 252Right-handed 310
Helix 12
AB3
A
268 280Right-handed alpha
Helix 13
AB4
A
288 296Right-handed alpha
Helix 14
AB5
A
299 309Right-handed alpha
Helix 15
AB6
B
80 96Right-handed alpha
Helix 16
AB7
B
110 118Right-handed alpha
Helix 17
AB8
B
131 142Right-handed alpha
Helix 18
AB9
B
145 150Right-handed alpha
Helix 19
AC1
B
160 168Right-handed alpha
Helix 20
AC2
B
188 192Right-handed 310
Helix 21
AC3
B
193 200Right-handed alpha
Helix 22
AC4
B
201 203Right-handed 310
Helix 23
AC5
B
221 225Right-handed 310
Helix 24
AC6
B
226 236Right-handed alpha
Helix 25
AC7
B
249 252Right-handed 310
Helix 26
AC8
B
268 280Right-handed alpha
Helix 27
AC9
B
288 296Right-handed alpha
Helix 28
AD1
B
299 309Right-handed alpha
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There are 4 sheets in PDB entry 6BQ5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 33first strand
Strand 2
A
36 50anti-parallel
Strand 3
B
36 50anti-parallel
Strand 4
B
27 33anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 77first strand
Strand 2
A
65 70anti-parallel
Strand 3
A
55 61anti-parallel
Strand 4
A
36 50anti-parallel
Strand 5
B
36 50anti-parallel
Strand 6
B
55 61anti-parallel
Strand 7
B
65 70anti-parallel
Strand 8
B
73 77anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 158first strand
Strand 2
A
124 129parallel
Strand 3
A
101 106parallel
Strand 4
A
172 178parallel
Strand 5
A
205 217parallel
Strand 6
A
253 261anti-parallel
Strand 7
A
240 248anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 158first strand
Strand 2
B
124 129parallel
Strand 3
B
101 106parallel
Strand 4
B
172 178parallel
Strand 5
B
205 217parallel
Strand 6
B
253 261anti-parallel
Strand 7
B
240 248anti-parallel
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