Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BQ9 entry

There is 1 chain in PDB entry 6BQ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 35ALA 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6BQ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 59Right-handed alpha
Helix 2
AA2
A
70 81Right-handed alpha
Helix 3
AA3
A
85 97Right-handed alpha
Helix 4
AA4
A
136 141Right-handed alpha
Helix 5
AA5
A
169 175Right-handed alpha
Helix 6
AA6
A
191 205Right-handed alpha
Helix 7
AA7
A
209 214Right-handed alpha
Helix 8
AA8
A
231 242Right-handed alpha
Helix 9
AA9
A
269 283Right-handed alpha
Helix 10
AB1
A
314 326Right-handed alpha
Helix 11
AB2
A
349 392Right-handed alpha
Helix 12
AB3
A
392 402Right-handed alpha
Helix 13
AB4
A
405 414Right-handed alpha
Helix 14
AB5
A
417 427Right-handed alpha
Helix 15
AB6
A
428 434Right-handed alpha
Helix 16
AB7
A
436 459Right-handed alpha
Helix 17
AB8
A
460 480Right-handed alpha
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There are 6 sheets in PDB entry 6BQ9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 69first strand
Strand 2
A
129 132anti-parallel
Strand 3
A
107 110anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
118 122anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
159 161anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 228first strand
Strand 2
A
243 249anti-parallel
Strand 3
A
329 335anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 255first strand
Strand 2
A
258 263anti-parallel
Strand 3
A
304 308anti-parallel
Strand 4
A
289 294anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
345 347anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il