Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BQE entry

There are 3 chains in PDB entry 6BQE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 13	HIS 252
B	GLU 13	HIS 252
C	GLU 13	HIS 252

There are 36 helices in PDB entry 6BQE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	23	Right-handed alpha
Helix 2	AA2	A	47	60	Right-handed alpha
Helix 3	AA3	A	70	80	Right-handed alpha
Helix 4	AA4	A	93	98	Right-handed alpha
Helix 5	AA5	A	118	124	Right-handed 310
Helix 6	AA6	A	125	130	Right-handed alpha
Helix 7	AA7	A	142	152	Right-handed alpha
Helix 8	AA8	A	164	166	Right-handed 310
Helix 9	AA9	A	167	172	Right-handed alpha
Helix 10	AB1	A	182	192	Right-handed alpha
Helix 11	AB2	A	216	233	Right-handed alpha
Helix 12	AB3	A	234	246	Right-handed alpha
Helix 13	AB4	B	14	23	Right-handed alpha
Helix 14	AB5	B	47	60	Right-handed alpha
Helix 15	AB6	B	70	80	Right-handed alpha
Helix 16	AB7	B	93	98	Right-handed alpha
Helix 17	AB8	B	118	124	Right-handed 310
Helix 18	AB9	B	125	130	Right-handed alpha
Helix 19	AC1	B	142	152	Right-handed alpha
Helix 20	AC2	B	164	166	Right-handed 310
Helix 21	AC3	B	167	172	Right-handed alpha
Helix 22	AC4	B	182	192	Right-handed alpha
Helix 23	AC5	B	216	233	Right-handed alpha
Helix 24	AC6	B	234	246	Right-handed alpha
Helix 25	AC7	C	14	23	Right-handed alpha
Helix 26	AC8	C	47	60	Right-handed alpha
Helix 27	AC9	C	73	80	Right-handed alpha
Helix 28	AD1	C	93	98	Right-handed alpha
Helix 29	AD2	C	118	124	Right-handed 310
Helix 30	AD3	C	125	130	Right-handed alpha
Helix 31	AD4	C	142	152	Right-handed alpha
Helix 32	AD5	C	164	166	Right-handed 310
Helix 33	AD6	C	167	172	Right-handed alpha
Helix 34	AD7	C	182	192	Right-handed alpha
Helix 35	AD8	C	216	233	Right-handed alpha
Helix 36	AD9	C	234	246	Right-handed alpha

There are 18 sheets in PDB entry 6BQE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	68	first strand
Strand 2	A	24	29	parallel
Strand 3	A	85	86	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	37	39	anti-parallel
Strand 3	A	45	46	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	102	first strand
Strand 2	A	212	213	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	107	109	first strand
Strand 2	A	207	209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	181	first strand
Strand 2	A	111	116	anti-parallel
Strand 3	A	195	197	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	138	first strand
Strand 2	A	156	159	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	68	first strand
Strand 2	B	24	29	parallel
Strand 3	B	85	86	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	37	39	anti-parallel
Strand 3	B	45	46	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	102	first strand
Strand 2	B	212	213	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	109	first strand
Strand 2	B	207	209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	181	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	195	197	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	138	first strand
Strand 2	B	156	159	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	63	68	first strand
Strand 2	C	24	29	parallel
Strand 3	C	85	86	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	37	39	anti-parallel
Strand 3	C	45	46	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	101	102	first strand
Strand 2	C	212	213	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	107	109	first strand
Strand 2	C	207	209	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	181	first strand
Strand 2	C	111	116	anti-parallel
Strand 3	C	195	197	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	138	first strand
Strand 2	C	156	159	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BQE

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQE