Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BQR entry

There are 4 chains in PDB entry 6BQR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 75	TYR 1168
B	TYR 75	TYR 1168
C	TYR 75	TYR 1168
D	TYR 75	TYR 1168

There are180 helices in PDB entry 6BQR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	108	Right-handed alpha
Helix 2	AA2	A	131	140	Right-handed alpha
Helix 3	AA3	A	141	150	Right-handed alpha
Helix 4	AA4	A	161	177	Right-handed alpha
Helix 5	AA5	A	244	260	Right-handed alpha
Helix 6	AA6	A	281	294	Right-handed alpha
Helix 7	AA7	A	307	316	Right-handed alpha
Helix 8	AA8	A	326	339	Right-handed alpha
Helix 9	AA9	A	343	358	Right-handed alpha
Helix 10	AB1	A	372	386	Right-handed alpha
Helix 11	AB2	A	397	403	Right-handed alpha
Helix 12	AB3	A	405	415	Right-handed alpha
Helix 13	AB4	A	421	435	Right-handed alpha
Helix 14	AB5	A	437	447	Right-handed alpha
Helix 15	AB6	A	456	466	Right-handed alpha
Helix 16	AB7	A	473	483	Right-handed alpha
Helix 17	AB8	A	504	510	Right-handed alpha
Helix 18	AB9	A	559	569	Right-handed alpha
Helix 19	AC1	A	571	582	Right-handed alpha
Helix 20	AC2	A	584	603	Right-handed alpha
Helix 21	AC3	A	605	632	Right-handed alpha
Helix 22	AC4	A	634	643	Right-handed alpha
Helix 23	AC5	A	655	661	Right-handed alpha
Helix 24	AC6	A	663	669	Right-handed alpha
Helix 25	AC7	A	669	681	Right-handed alpha
Helix 26	AC8	A	690	698	Right-handed alpha
Helix 27	AC9	A	699	704	Right-handed 310
Helix 28	AD1	A	767	777	Right-handed alpha
Helix 29	AD2	A	778	803	Right-handed alpha
Helix 30	AD3	A	811	835	Right-handed alpha
Helix 31	AD4	A	853	860	Right-handed alpha
Helix 32	AD5	A	863	884	Right-handed alpha
Helix 33	AD6	A	887	910	Right-handed alpha
Helix 34	AD7	A	916	923	Right-handed alpha
Helix 35	AD8	A	926	952	Right-handed alpha
Helix 36	AD9	A	958	967	Right-handed alpha
Helix 37	AE1	A	967	973	Right-handed alpha
Helix 38	AE2	A	974	976	Right-handed 310
Helix 39	AE3	A	979	984	Right-handed alpha
Helix 40	AE4	A	985	988	Right-handed 310
Helix 41	AE5	A	1016	1031	Right-handed alpha
Helix 42	AE6	A	1034	1072	Right-handed alpha
Helix 43	AE7	A	1080	1089	Right-handed alpha
Helix 44	AE8	A	1114	1142	Right-handed alpha
Helix 45	AE9	A	1143	1164	Right-handed alpha
Helix 46	AF1	B	99	108	Right-handed alpha
Helix 47	AF2	B	131	140	Right-handed alpha
Helix 48	AF3	B	141	150	Right-handed alpha
Helix 49	AF4	B	161	177	Right-handed alpha
Helix 50	AF5	B	244	260	Right-handed alpha
Helix 51	AF6	B	281	294	Right-handed alpha
Helix 52	AF7	B	307	316	Right-handed alpha
Helix 53	AF8	B	326	339	Right-handed alpha
Helix 54	AF9	B	343	358	Right-handed alpha
Helix 55	AG1	B	372	386	Right-handed alpha
Helix 56	AG2	B	397	403	Right-handed alpha
Helix 57	AG3	B	405	415	Right-handed alpha
Helix 58	AG4	B	421	435	Right-handed alpha
Helix 59	AG5	B	437	447	Right-handed alpha
Helix 60	AG6	B	456	466	Right-handed alpha
Helix 61	AG7	B	473	483	Right-handed alpha
Helix 62	AG8	B	504	510	Right-handed alpha
Helix 63	AG9	B	559	569	Right-handed alpha
Helix 64	AH1	B	571	582	Right-handed alpha
Helix 65	AH2	B	584	603	Right-handed alpha
Helix 66	AH3	B	605	632	Right-handed alpha
Helix 67	AH4	B	634	643	Right-handed alpha
Helix 68	AH5	B	655	661	Right-handed alpha
Helix 69	AH6	B	663	669	Right-handed alpha
Helix 70	AH7	B	669	681	Right-handed alpha
Helix 71	AH8	B	690	698	Right-handed alpha
Helix 72	AH9	B	699	704	Right-handed 310
Helix 73	AI1	B	767	777	Right-handed alpha
Helix 74	AI2	B	778	803	Right-handed alpha
Helix 75	AI3	B	811	835	Right-handed alpha
Helix 76	AI4	B	853	860	Right-handed alpha
Helix 77	AI5	B	863	884	Right-handed alpha
Helix 78	AI6	B	887	910	Right-handed alpha
Helix 79	AI7	B	916	926	Right-handed alpha
Helix 80	AI8	B	926	952	Right-handed alpha
Helix 81	AI9	B	958	967	Right-handed alpha
Helix 82	AJ1	B	967	973	Right-handed alpha
Helix 83	AJ2	B	974	976	Right-handed 310
Helix 84	AJ3	B	979	984	Right-handed alpha
Helix 85	AJ4	B	985	988	Right-handed 310
Helix 86	AJ5	B	1016	1031	Right-handed alpha
Helix 87	AJ6	B	1034	1072	Right-handed alpha
Helix 88	AJ7	B	1080	1089	Right-handed alpha
Helix 89	AJ8	B	1114	1142	Right-handed alpha
Helix 90	AJ9	B	1143	1164	Right-handed alpha
Helix 91	AK1	C	99	108	Right-handed alpha
Helix 92	AK2	C	131	140	Right-handed alpha
Helix 93	AK3	C	141	150	Right-handed alpha
Helix 94	AK4	C	161	177	Right-handed alpha
Helix 95	AK5	C	244	260	Right-handed alpha
Helix 96	AK6	C	281	294	Right-handed alpha
Helix 97	AK7	C	307	316	Right-handed alpha
Helix 98	AK8	C	326	339	Right-handed alpha
Helix 99	AK9	C	343	358	Right-handed alpha
Helix 100	AL1	C	372	386	Right-handed alpha
Helix 101	AL2	C	397	403	Right-handed alpha
Helix 102	AL3	C	405	415	Right-handed alpha
Helix 103	AL4	C	421	435	Right-handed alpha
Helix 104	AL5	C	437	447	Right-handed alpha
Helix 105	AL6	C	456	466	Right-handed alpha
Helix 106	AL7	C	473	483	Right-handed alpha
Helix 107	AL8	C	504	510	Right-handed alpha
Helix 108	AL9	C	559	569	Right-handed alpha
Helix 109	AM1	C	571	582	Right-handed alpha
Helix 110	AM2	C	584	603	Right-handed alpha
Helix 111	AM3	C	605	632	Right-handed alpha
Helix 112	AM4	C	634	643	Right-handed alpha
Helix 113	AM5	C	655	661	Right-handed alpha
Helix 114	AM6	C	663	669	Right-handed alpha
Helix 115	AM7	C	669	681	Right-handed alpha
Helix 116	AM8	C	690	698	Right-handed alpha
Helix 117	AM9	C	699	704	Right-handed 310
Helix 118	AN1	C	767	777	Right-handed alpha
Helix 119	AN2	C	778	803	Right-handed alpha
Helix 120	AN3	C	811	835	Right-handed alpha
Helix 121	AN4	C	853	860	Right-handed alpha
Helix 122	AN5	C	863	884	Right-handed alpha
Helix 123	AN6	C	887	910	Right-handed alpha
Helix 124	AN7	C	916	923	Right-handed alpha
Helix 125	AN8	C	926	952	Right-handed alpha
Helix 126	AN9	C	958	967	Right-handed alpha
Helix 127	AO1	C	967	973	Right-handed alpha
Helix 128	AO2	C	974	976	Right-handed 310
Helix 129	AO3	C	979	984	Right-handed alpha
Helix 130	AO4	C	985	988	Right-handed 310
Helix 131	AO5	C	1016	1031	Right-handed alpha
Helix 132	AO6	C	1034	1072	Right-handed alpha
Helix 133	AO7	C	1080	1089	Right-handed alpha
Helix 134	AO8	C	1114	1142	Right-handed alpha
Helix 135	AO9	C	1143	1164	Right-handed alpha
Helix 136	AP1	D	99	108	Right-handed alpha
Helix 137	AP2	D	131	140	Right-handed alpha
Helix 138	AP3	D	141	150	Right-handed alpha
Helix 139	AP4	D	161	177	Right-handed alpha
Helix 140	AP5	D	244	260	Right-handed alpha
Helix 141	AP6	D	281	294	Right-handed alpha
Helix 142	AP7	D	307	316	Right-handed alpha
Helix 143	AP8	D	326	339	Right-handed alpha
Helix 144	AP9	D	343	358	Right-handed alpha
Helix 145	AQ1	D	372	386	Right-handed alpha
Helix 146	AQ2	D	397	403	Right-handed alpha
Helix 147	AQ3	D	405	415	Right-handed alpha
Helix 148	AQ4	D	421	435	Right-handed alpha
Helix 149	AQ5	D	437	447	Right-handed alpha
Helix 150	AQ6	D	456	466	Right-handed alpha
Helix 151	AQ7	D	473	483	Right-handed alpha
Helix 152	AQ8	D	504	510	Right-handed alpha
Helix 153	AQ9	D	559	569	Right-handed alpha
Helix 154	AR1	D	571	582	Right-handed alpha
Helix 155	AR2	D	584	603	Right-handed alpha
Helix 156	AR3	D	605	632	Right-handed alpha
Helix 157	AR4	D	634	643	Right-handed alpha
Helix 158	AR5	D	655	661	Right-handed alpha
Helix 159	AR6	D	663	669	Right-handed alpha
Helix 160	AR7	D	669	681	Right-handed alpha
Helix 161	AR8	D	690	698	Right-handed alpha
Helix 162	AR9	D	699	704	Right-handed 310
Helix 163	AS1	D	767	777	Right-handed alpha
Helix 164	AS2	D	778	803	Right-handed alpha
Helix 165	AS3	D	811	835	Right-handed alpha
Helix 166	AS4	D	853	860	Right-handed alpha
Helix 167	AS5	D	863	884	Right-handed alpha
Helix 168	AS6	D	887	910	Right-handed alpha
Helix 169	AS7	D	916	926	Right-handed alpha
Helix 170	AS8	D	926	952	Right-handed alpha
Helix 171	AS9	D	958	967	Right-handed alpha
Helix 172	AT1	D	967	973	Right-handed alpha
Helix 173	AT2	D	974	976	Right-handed 310
Helix 174	AT3	D	979	984	Right-handed alpha
Helix 175	AT4	D	985	988	Right-handed 310
Helix 176	AT5	D	1016	1031	Right-handed alpha
Helix 177	AT6	D	1034	1072	Right-handed alpha
Helix 178	AT7	D	1080	1089	Right-handed alpha
Helix 179	AT8	D	1114	1142	Right-handed alpha
Helix 180	AT9	D	1143	1164	Right-handed alpha

There are 12 sheets in PDB entry 6BQR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	231	235	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	187	first strand
Strand 2	A	152	155	parallel
Strand 3	A	118	122	parallel
Strand 4	A	273	277	parallel
Strand 5	A	298	301	parallel
Strand 6	A	361	364	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	269	270	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	231	235	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	187	first strand
Strand 2	B	152	155	parallel
Strand 3	B	118	122	parallel
Strand 4	B	273	277	parallel
Strand 5	B	298	301	parallel
Strand 6	B	361	364	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	262	first strand
Strand 2	B	269	270	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	93	first strand
Strand 2	C	231	235	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	187	first strand
Strand 2	C	152	155	parallel
Strand 3	C	118	122	parallel
Strand 4	C	273	277	parallel
Strand 5	C	298	301	parallel
Strand 6	C	361	364	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	262	first strand
Strand 2	C	269	270	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	231	235	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	187	first strand
Strand 2	D	152	155	parallel
Strand 3	D	118	122	parallel
Strand 4	D	273	277	parallel
Strand 5	D	298	301	parallel
Strand 6	D	361	364	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	262	first strand
Strand 2	D	269	270	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BQR

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQR