Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BQV entry

There are 4 chains in PDB entry 6BQV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 81	LEU 1175
B	THR 81	LEU 1175
C	THR 81	LEU 1175
D	THR 81	LEU 1175

There are184 helices in PDB entry 6BQV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	99	108	Right-handed alpha
Helix 2	AA2	A	131	140	Right-handed alpha
Helix 3	AA3	A	141	150	Right-handed alpha
Helix 4	AA4	A	161	177	Right-handed alpha
Helix 5	AA5	A	244	260	Right-handed alpha
Helix 6	AA6	A	281	294	Right-handed alpha
Helix 7	AA7	A	307	316	Right-handed alpha
Helix 8	AA8	A	330	339	Right-handed alpha
Helix 9	AA9	A	343	358	Right-handed alpha
Helix 10	AB1	A	372	386	Right-handed alpha
Helix 11	AB2	A	397	403	Right-handed alpha
Helix 12	AB3	A	405	415	Right-handed alpha
Helix 13	AB4	A	421	435	Right-handed alpha
Helix 14	AB5	A	437	447	Right-handed alpha
Helix 15	AB6	A	456	466	Right-handed alpha
Helix 16	AB7	A	473	481	Right-handed alpha
Helix 17	AB8	A	504	510	Right-handed alpha
Helix 18	AB9	A	559	569	Right-handed alpha
Helix 19	AC1	A	571	579	Right-handed alpha
Helix 20	AC2	A	584	602	Right-handed alpha
Helix 21	AC3	A	607	634	Right-handed alpha
Helix 22	AC4	A	634	643	Right-handed alpha
Helix 23	AC5	A	653	661	Right-handed alpha
Helix 24	AC6	A	663	668	Right-handed alpha
Helix 25	AC7	A	669	681	Right-handed alpha
Helix 26	AC8	A	689	698	Right-handed alpha
Helix 27	AC9	A	699	705	Right-handed 310
Helix 28	AD1	A	768	777	Right-handed alpha
Helix 29	AD2	A	778	804	Right-handed alpha
Helix 30	AD3	A	811	830	Right-handed alpha
Helix 31	AD4	A	851	860	Right-handed alpha
Helix 32	AD5	A	862	884	Right-handed alpha
Helix 33	AD6	A	887	910	Right-handed alpha
Helix 34	AD7	A	916	921	Right-handed alpha
Helix 35	AD8	A	926	952	Right-handed alpha
Helix 36	AD9	A	958	966	Right-handed alpha
Helix 37	AE1	A	967	973	Right-handed alpha
Helix 38	AE2	A	974	976	Right-handed 310
Helix 39	AE3	A	979	984	Right-handed alpha
Helix 40	AE4	A	985	988	Right-handed 310
Helix 41	AE5	A	1016	1031	Right-handed alpha
Helix 42	AE6	A	1033	1071	Right-handed alpha
Helix 43	AE7	A	1086	1094	Right-handed alpha
Helix 44	AE8	A	1114	1142	Right-handed alpha
Helix 45	AE9	A	1143	1167	Right-handed alpha
Helix 46	AF1	A	1167	1175	Right-handed alpha
Helix 47	AF2	B	99	108	Right-handed alpha
Helix 48	AF3	B	131	140	Right-handed alpha
Helix 49	AF4	B	141	150	Right-handed alpha
Helix 50	AF5	B	161	177	Right-handed alpha
Helix 51	AF6	B	244	260	Right-handed alpha
Helix 52	AF7	B	281	294	Right-handed alpha
Helix 53	AF8	B	307	316	Right-handed alpha
Helix 54	AF9	B	330	339	Right-handed alpha
Helix 55	AG1	B	343	358	Right-handed alpha
Helix 56	AG2	B	372	386	Right-handed alpha
Helix 57	AG3	B	397	403	Right-handed alpha
Helix 58	AG4	B	405	415	Right-handed alpha
Helix 59	AG5	B	421	435	Right-handed alpha
Helix 60	AG6	B	437	447	Right-handed alpha
Helix 61	AG7	B	456	466	Right-handed alpha
Helix 62	AG8	B	473	481	Right-handed alpha
Helix 63	AG9	B	504	510	Right-handed alpha
Helix 64	AH1	B	559	569	Right-handed alpha
Helix 65	AH2	B	571	579	Right-handed alpha
Helix 66	AH3	B	584	602	Right-handed alpha
Helix 67	AH4	B	607	634	Right-handed alpha
Helix 68	AH5	B	634	643	Right-handed alpha
Helix 69	AH6	B	653	661	Right-handed alpha
Helix 70	AH7	B	663	668	Right-handed alpha
Helix 71	AH8	B	669	681	Right-handed alpha
Helix 72	AH9	B	689	698	Right-handed alpha
Helix 73	AI1	B	699	705	Right-handed 310
Helix 74	AI2	B	768	777	Right-handed alpha
Helix 75	AI3	B	778	804	Right-handed alpha
Helix 76	AI4	B	811	830	Right-handed alpha
Helix 77	AI5	B	851	860	Right-handed alpha
Helix 78	AI6	B	862	884	Right-handed alpha
Helix 79	AI7	B	887	910	Right-handed alpha
Helix 80	AI8	B	916	921	Right-handed alpha
Helix 81	AI9	B	926	952	Right-handed alpha
Helix 82	AJ1	B	958	966	Right-handed alpha
Helix 83	AJ2	B	967	973	Right-handed alpha
Helix 84	AJ3	B	974	976	Right-handed 310
Helix 85	AJ4	B	979	984	Right-handed alpha
Helix 86	AJ5	B	985	988	Right-handed 310
Helix 87	AJ6	B	1016	1031	Right-handed alpha
Helix 88	AJ7	B	1033	1071	Right-handed alpha
Helix 89	AJ8	B	1086	1094	Right-handed alpha
Helix 90	AJ9	B	1114	1142	Right-handed alpha
Helix 91	AK1	B	1143	1167	Right-handed alpha
Helix 92	AK2	B	1167	1175	Right-handed alpha
Helix 93	AK3	C	99	108	Right-handed alpha
Helix 94	AK4	C	131	140	Right-handed alpha
Helix 95	AK5	C	141	150	Right-handed alpha
Helix 96	AK6	C	161	177	Right-handed alpha
Helix 97	AK7	C	244	260	Right-handed alpha
Helix 98	AK8	C	281	294	Right-handed alpha
Helix 99	AK9	C	307	316	Right-handed alpha
Helix 100	AL1	C	330	339	Right-handed alpha
Helix 101	AL2	C	343	358	Right-handed alpha
Helix 102	AL3	C	372	386	Right-handed alpha
Helix 103	AL4	C	397	403	Right-handed alpha
Helix 104	AL5	C	405	415	Right-handed alpha
Helix 105	AL6	C	421	435	Right-handed alpha
Helix 106	AL7	C	437	447	Right-handed alpha
Helix 107	AL8	C	456	466	Right-handed alpha
Helix 108	AL9	C	473	481	Right-handed alpha
Helix 109	AM1	C	504	510	Right-handed alpha
Helix 110	AM2	C	559	569	Right-handed alpha
Helix 111	AM3	C	571	579	Right-handed alpha
Helix 112	AM4	C	584	602	Right-handed alpha
Helix 113	AM5	C	607	634	Right-handed alpha
Helix 114	AM6	C	634	643	Right-handed alpha
Helix 115	AM7	C	653	661	Right-handed alpha
Helix 116	AM8	C	663	668	Right-handed alpha
Helix 117	AM9	C	669	681	Right-handed alpha
Helix 118	AN1	C	689	698	Right-handed alpha
Helix 119	AN2	C	699	705	Right-handed 310
Helix 120	AN3	C	768	777	Right-handed alpha
Helix 121	AN4	C	778	804	Right-handed alpha
Helix 122	AN5	C	811	830	Right-handed alpha
Helix 123	AN6	C	851	860	Right-handed alpha
Helix 124	AN7	C	862	884	Right-handed alpha
Helix 125	AN8	C	887	910	Right-handed alpha
Helix 126	AN9	C	916	921	Right-handed alpha
Helix 127	AO1	C	926	952	Right-handed alpha
Helix 128	AO2	C	958	966	Right-handed alpha
Helix 129	AO3	C	967	973	Right-handed alpha
Helix 130	AO4	C	974	976	Right-handed 310
Helix 131	AO5	C	979	984	Right-handed alpha
Helix 132	AO6	C	985	988	Right-handed 310
Helix 133	AO7	C	1016	1031	Right-handed alpha
Helix 134	AO8	C	1033	1071	Right-handed alpha
Helix 135	AO9	C	1086	1094	Right-handed alpha
Helix 136	AP1	C	1114	1142	Right-handed alpha
Helix 137	AP2	C	1143	1167	Right-handed alpha
Helix 138	AP3	C	1167	1175	Right-handed alpha
Helix 139	AP4	D	99	108	Right-handed alpha
Helix 140	AP5	D	131	140	Right-handed alpha
Helix 141	AP6	D	141	150	Right-handed alpha
Helix 142	AP7	D	161	177	Right-handed alpha
Helix 143	AP8	D	244	260	Right-handed alpha
Helix 144	AP9	D	281	294	Right-handed alpha
Helix 145	AQ1	D	307	316	Right-handed alpha
Helix 146	AQ2	D	330	339	Right-handed alpha
Helix 147	AQ3	D	343	358	Right-handed alpha
Helix 148	AQ4	D	372	386	Right-handed alpha
Helix 149	AQ5	D	397	403	Right-handed alpha
Helix 150	AQ6	D	405	415	Right-handed alpha
Helix 151	AQ7	D	421	435	Right-handed alpha
Helix 152	AQ8	D	437	447	Right-handed alpha
Helix 153	AQ9	D	456	466	Right-handed alpha
Helix 154	AR1	D	473	481	Right-handed alpha
Helix 155	AR2	D	504	510	Right-handed alpha
Helix 156	AR3	D	559	569	Right-handed alpha
Helix 157	AR4	D	571	579	Right-handed alpha
Helix 158	AR5	D	584	602	Right-handed alpha
Helix 159	AR6	D	607	634	Right-handed alpha
Helix 160	AR7	D	634	643	Right-handed alpha
Helix 161	AR8	D	653	661	Right-handed alpha
Helix 162	AR9	D	663	668	Right-handed alpha
Helix 163	AS1	D	669	681	Right-handed alpha
Helix 164	AS2	D	689	698	Right-handed alpha
Helix 165	AS3	D	699	705	Right-handed 310
Helix 166	AS4	D	768	777	Right-handed alpha
Helix 167	AS5	D	778	804	Right-handed alpha
Helix 168	AS6	D	811	830	Right-handed alpha
Helix 169	AS7	D	851	860	Right-handed alpha
Helix 170	AS8	D	862	884	Right-handed alpha
Helix 171	AS9	D	887	910	Right-handed alpha
Helix 172	AT1	D	916	921	Right-handed alpha
Helix 173	AT2	D	926	952	Right-handed alpha
Helix 174	AT3	D	958	966	Right-handed alpha
Helix 175	AT4	D	967	973	Right-handed alpha
Helix 176	AT5	D	974	976	Right-handed 310
Helix 177	AT6	D	979	984	Right-handed alpha
Helix 178	AT7	D	985	988	Right-handed 310
Helix 179	AT8	D	1016	1031	Right-handed alpha
Helix 180	AT9	D	1033	1071	Right-handed alpha
Helix 181	AU1	D	1086	1094	Right-handed alpha
Helix 182	AU2	D	1114	1142	Right-handed alpha
Helix 183	AU3	D	1143	1167	Right-handed alpha
Helix 184	AU4	D	1167	1175	Right-handed alpha

There are 16 sheets in PDB entry 6BQV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	93	first strand
Strand 2	A	231	235	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	185	187	first strand
Strand 2	A	152	155	parallel
Strand 3	A	118	122	parallel
Strand 4	A	273	277	parallel
Strand 5	A	298	301	parallel
Strand 6	A	361	364	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	269	270	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1000	1001	first strand
Strand 2	A	1012	1013	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	93	first strand
Strand 2	B	231	235	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	187	first strand
Strand 2	B	152	155	parallel
Strand 3	B	118	122	parallel
Strand 4	B	273	277	parallel
Strand 5	B	298	301	parallel
Strand 6	B	361	364	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	262	first strand
Strand 2	B	269	270	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1000	1001	first strand
Strand 2	B	1012	1013	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	89	93	first strand
Strand 2	C	231	235	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	185	187	first strand
Strand 2	C	152	155	parallel
Strand 3	C	118	122	parallel
Strand 4	C	273	277	parallel
Strand 5	C	298	301	parallel
Strand 6	C	361	364	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	262	first strand
Strand 2	C	269	270	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1000	1001	first strand
Strand 2	C	1012	1013	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	89	93	first strand
Strand 2	D	231	235	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	185	187	first strand
Strand 2	D	152	155	parallel
Strand 3	D	118	122	parallel
Strand 4	D	273	277	parallel
Strand 5	D	298	301	parallel
Strand 6	D	361	364	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	262	first strand
Strand 2	D	269	270	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1000	1001	first strand
Strand 2	D	1012	1013	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BQV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BQV