Analysis of interatomic Contacts of Structural Units in PDB entry:
6BR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BR8 entry

There are 2 chains in PDB entry 6BR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 126LEU 374
B
 MSE 126LEU 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6BR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
126 149Right-handed alpha
Helix 2
AA2
A
152 163Right-handed alpha
Helix 3
AA3
A
163 177Right-handed alpha
Helix 4
AA4
A
179 189Right-handed alpha
Helix 5
AA5
A
189 194Right-handed alpha
Helix 6
AA6
A
195 207Right-handed alpha
Helix 7
AA7
A
209 221Right-handed alpha
Helix 8
AA8
A
233 243Right-handed alpha
Helix 9
AA9
A
246 253Right-handed alpha
Helix 10
AB1
A
255 277Right-handed alpha
Helix 11
AB2
A
277 293Right-handed alpha
Helix 12
AB3
A
296 303Right-handed alpha
Helix 13
AB4
A
307 318Right-handed alpha
Helix 14
AB5
A
318 333Right-handed alpha
Helix 15
AB6
A
333 348Right-handed alpha
Helix 16
AB7
A
358 370Right-handed alpha
Helix 17
AB8
A
371 374Right-handed 310
Helix 18
AB9
B
127 149Right-handed alpha
Helix 19
AC1
B
152 163Right-handed alpha
Helix 20
AC2
B
163 177Right-handed alpha
Helix 21
AC3
B
179 189Right-handed alpha
Helix 22
AC4
B
190 193Right-handed 310
Helix 23
AC5
B
195 207Right-handed alpha
Helix 24
AC6
B
209 221Right-handed alpha
Helix 25
AC7
B
233 243Right-handed alpha
Helix 26
AC8
B
246 253Right-handed alpha
Helix 27
AC9
B
255 277Right-handed alpha
Helix 28
AD1
B
277 295Right-handed alpha
Helix 29
AD2
B
296 303Right-handed alpha
Helix 30
AD3
B
307 318Right-handed alpha
Helix 31
AD4
B
318 348Right-handed alpha
Helix 32
AD5
B
358 370Right-handed alpha
Helix 33
AD6
B
371 374Right-handed 310
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There are 2 sheets in PDB entry 6BR8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 225first strand
Strand 2
A
350 352anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 225first strand
Strand 2
B
350 352anti-parallel
Strand 3
B
355 356anti-parallel
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