Analysis of interatomic Contacts of Structural Units in PDB entry:
6BRG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BRG entry

There are 3 chains in PDB entry 6BRG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 72	GLN 624
B	THR 72	GLN 624
C	THR 72	LEU 284

There are138 helices in PDB entry 6BRG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	78	88	Right-handed alpha
Helix 2	AA2	A	93	103	Right-handed alpha
Helix 3	AA3	A	106	113	Right-handed 310
Helix 4	AA4	A	114	122	Right-handed alpha
Helix 5	AA5	A	125	139	Right-handed alpha
Helix 6	AA6	A	143	147	Right-handed 310
Helix 7	AA7	A	161	169	Right-handed alpha
Helix 8	AA8	A	170	175	Right-handed alpha
Helix 9	AA9	A	176	179	Right-handed 310
Helix 10	AB1	A	182	188	Right-handed 310
Helix 11	AB2	A	195	218	Right-handed alpha
Helix 12	AB3	A	219	222	Right-handed 310
Helix 13	AB4	A	224	238	Right-handed alpha
Helix 14	AB5	A	246	252	Right-handed alpha
Helix 15	AB6	A	252	258	Right-handed alpha
Helix 16	AB7	A	264	280	Right-handed alpha
Helix 17	AB8	A	281	289	Right-handed alpha
Helix 18	AB9	A	292	306	Right-handed alpha
Helix 19	AC1	A	323	332	Right-handed 310
Helix 20	AC2	A	341	356	Right-handed alpha
Helix 21	AC3	A	362	369	Right-handed alpha
Helix 22	AC4	A	398	416	Right-handed alpha
Helix 23	AC5	A	419	437	Right-handed alpha
Helix 24	AC6	A	445	447	Right-handed 310
Helix 25	AC7	A	454	457	Right-handed 310
Helix 26	AC8	A	458	463	Right-handed alpha
Helix 27	AC9	A	464	465	Right-handed 310
Helix 28	AD1	A	466	467	Right-handed 310
Helix 29	AD2	A	468	476	Right-handed alpha
Helix 30	AD3	A	478	480	Right-handed 310
Helix 31	AD4	A	481	493	Right-handed alpha
Helix 32	AD5	A	513	516	Right-handed 310
Helix 33	AD6	A	517	525	Right-handed alpha
Helix 34	AD7	A	536	538	Right-handed 310
Helix 35	AD8	A	600	618	Right-handed alpha
Helix 36	AD9	B	78	88	Right-handed alpha
Helix 37	AE1	B	93	103	Right-handed alpha
Helix 38	AE2	B	106	113	Right-handed 310
Helix 39	AE3	B	114	122	Right-handed alpha
Helix 40	AE4	B	125	139	Right-handed alpha
Helix 41	AE5	B	161	169	Right-handed alpha
Helix 42	AE6	B	170	175	Right-handed alpha
Helix 43	AE7	B	176	179	Right-handed 310
Helix 44	AE8	B	182	188	Right-handed 310
Helix 45	AE9	B	195	218	Right-handed alpha
Helix 46	AF1	B	219	222	Right-handed 310
Helix 47	AF2	B	224	238	Right-handed alpha
Helix 48	AF3	B	246	252	Right-handed alpha
Helix 49	AF4	B	252	258	Right-handed alpha
Helix 50	AF5	B	264	280	Right-handed alpha
Helix 51	AF6	B	281	289	Right-handed alpha
Helix 52	AF7	B	292	306	Right-handed alpha
Helix 53	AF8	B	323	332	Right-handed 310
Helix 54	AF9	B	341	356	Right-handed alpha
Helix 55	AG1	B	362	369	Right-handed alpha
Helix 56	AG2	B	398	416	Right-handed alpha
Helix 57	AG3	B	419	437	Right-handed alpha
Helix 58	AG4	B	445	447	Right-handed 310
Helix 59	AG5	B	454	457	Right-handed 310
Helix 60	AG6	B	458	463	Right-handed alpha
Helix 61	AG7	B	464	465	Right-handed 310
Helix 62	AG8	B	466	467	Right-handed 310
Helix 63	AG9	B	468	475	Right-handed alpha
Helix 64	AH1	B	478	480	Right-handed 310
Helix 65	AH2	B	481	493	Right-handed alpha
Helix 66	AH3	B	513	516	Right-handed 310
Helix 67	AH4	B	517	525	Right-handed alpha
Helix 68	AH5	B	536	538	Right-handed 310
Helix 69	AH6	B	600	618	Right-handed alpha
Helix 70	AH7	C	78	88	Right-handed alpha
Helix 71	AH8	C	93	103	Right-handed alpha
Helix 72	AH9	C	106	113	Right-handed 310
Helix 73	AI1	C	114	122	Right-handed alpha
Helix 74	AI2	C	125	139	Right-handed alpha
Helix 75	AI3	C	161	169	Right-handed alpha
Helix 76	AI4	C	170	175	Right-handed alpha
Helix 77	AI5	C	176	179	Right-handed 310
Helix 78	AI6	C	182	188	Right-handed 310
Helix 79	AI7	C	195	218	Right-handed alpha
Helix 80	AI8	C	219	222	Right-handed 310
Helix 81	AI9	C	224	238	Right-handed alpha
Helix 82	AJ1	C	246	252	Right-handed alpha
Helix 83	AJ2	C	252	258	Right-handed alpha
Helix 84	AJ3	C	264	280	Right-handed alpha
Helix 85	AJ4	C	281	289	Right-handed alpha
Helix 86	AJ5	C	292	306	Right-handed alpha
Helix 87	AJ6	C	323	332	Right-handed 310
Helix 88	AJ7	C	341	356	Right-handed alpha
Helix 89	AJ8	C	362	369	Right-handed alpha
Helix 90	AJ9	C	398	416	Right-handed alpha
Helix 91	AK1	C	419	437	Right-handed alpha
Helix 92	AK2	C	445	447	Right-handed 310
Helix 93	AK3	C	454	457	Right-handed 310
Helix 94	AK4	C	458	463	Right-handed alpha
Helix 95	AK5	C	464	465	Right-handed 310
Helix 96	AK6	C	466	467	Right-handed 310
Helix 97	AK7	C	468	476	Right-handed alpha
Helix 98	AK8	C	478	480	Right-handed 310
Helix 99	AK9	C	481	493	Right-handed alpha
Helix 100	AL1	C	513	516	Right-handed 310
Helix 101	AL2	C	517	525	Right-handed alpha
Helix 102	AL3	C	536	538	Right-handed 310
Helix 103	AL4	C	600	618	Right-handed alpha
Helix 104	AL5	D	78	88	Right-handed alpha
Helix 105	AL6	D	93	103	Right-handed alpha
Helix 106	AL7	D	106	113	Right-handed 310
Helix 107	AL8	D	114	122	Right-handed alpha
Helix 108	AL9	D	125	139	Right-handed alpha
Helix 109	AM1	D	143	147	Right-handed 310
Helix 110	AM2	D	161	169	Right-handed alpha
Helix 111	AM3	D	170	175	Right-handed alpha
Helix 112	AM4	D	176	179	Right-handed 310
Helix 113	AM5	D	182	188	Right-handed 310
Helix 114	AM6	D	195	218	Right-handed alpha
Helix 115	AM7	D	219	222	Right-handed 310
Helix 116	AM8	D	224	238	Right-handed alpha
Helix 117	AM9	D	246	252	Right-handed alpha
Helix 118	AN1	D	252	258	Right-handed alpha
Helix 119	AN2	D	264	280	Right-handed alpha
Helix 120	AN3	D	281	289	Right-handed alpha
Helix 121	AN4	D	292	306	Right-handed alpha
Helix 122	AN5	D	323	332	Right-handed 310
Helix 123	AN6	D	341	356	Right-handed alpha
Helix 124	AN7	D	362	369	Right-handed alpha
Helix 125	AN8	D	398	416	Right-handed alpha
Helix 126	AN9	D	419	437	Right-handed alpha
Helix 127	AO1	D	445	447	Right-handed 310
Helix 128	AO2	D	454	457	Right-handed 310
Helix 129	AO3	D	458	463	Right-handed alpha
Helix 130	AO4	D	464	465	Right-handed 310
Helix 131	AO5	D	466	467	Right-handed 310
Helix 132	AO6	D	468	476	Right-handed alpha
Helix 133	AO7	D	478	480	Right-handed 310
Helix 134	AO8	D	481	493	Right-handed alpha
Helix 135	AO9	D	513	516	Right-handed 310
Helix 136	AP1	D	517	525	Right-handed alpha
Helix 137	AP2	D	536	538	Right-handed 310
Helix 138	AP3	D	600	618	Right-handed alpha

There are 16 sheets in PDB entry 6BRG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	152	first strand
Strand 2	A	156	160	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	377	first strand
Strand 2	A	387	394	anti-parallel
Strand 3	A	561	562	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	443	first strand
Strand 2	A	449	450	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	498	503	first strand
Strand 2	A	590	596	anti-parallel
Strand 3	A	540	546	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	152	first strand
Strand 2	B	156	160	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	377	first strand
Strand 2	B	387	394	anti-parallel
Strand 3	B	561	562	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	443	first strand
Strand 2	B	449	450	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	498	503	first strand
Strand 2	B	590	596	anti-parallel
Strand 3	B	540	546	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	152	first strand
Strand 2	C	156	160	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	370	377	first strand
Strand 2	C	387	394	anti-parallel
Strand 3	C	561	562	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	442	443	first strand
Strand 2	C	449	450	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	498	503	first strand
Strand 2	C	590	596	anti-parallel
Strand 3	C	540	546	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	152	first strand
Strand 2	D	156	160	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	370	377	first strand
Strand 2	D	387	394	anti-parallel
Strand 3	D	561	562	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	442	443	first strand
Strand 2	D	449	450	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	498	503	first strand
Strand 2	D	590	596	anti-parallel
Strand 3	D	540	546	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BRG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BRG