Analysis of interatomic Contacts of Structural Units in PDB entry:
6BRH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BRH entry

There are 2 chains in PDB entry 6BRH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 72GLN 624
B
 THR 72GLN 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 6BRH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 89Right-handed alpha
Helix 2
AA2
A
93 103Right-handed alpha
Helix 3
AA3
A
106 113Right-handed 310
Helix 4
AA4
A
114 122Right-handed alpha
Helix 5
AA5
A
127 139Right-handed alpha
Helix 6
AA6
A
161 169Right-handed alpha
Helix 7
AA7
A
170 175Right-handed alpha
Helix 8
AA8
A
176 179Right-handed 310
Helix 9
AA9
A
182 188Right-handed 310
Helix 10
AB1
A
195 218Right-handed alpha
Helix 11
AB2
A
219 222Right-handed 310
Helix 12
AB3
A
224 237Right-handed alpha
Helix 13
AB4
A
246 252Right-handed alpha
Helix 14
AB5
A
252 258Right-handed alpha
Helix 15
AB6
A
264 280Right-handed alpha
Helix 16
AB7
A
281 289Right-handed alpha
Helix 17
AB8
A
292 306Right-handed alpha
Helix 18
AB9
A
323 332Right-handed 310
Helix 19
AC1
A
341 356Right-handed alpha
Helix 20
AC2
A
362 369Right-handed alpha
Helix 21
AC3
A
398 416Right-handed alpha
Helix 22
AC4
A
419 437Right-handed alpha
Helix 23
AC5
A
445 447Right-handed 310
Helix 24
AC6
A
454 457Right-handed 310
Helix 25
AC7
A
458 463Right-handed alpha
Helix 26
AC8
A
464 465Right-handed 310
Helix 27
AC9
A
466 467Right-handed 310
Helix 28
AD1
A
468 476Right-handed alpha
Helix 29
AD2
A
478 480Right-handed 310
Helix 30
AD3
A
481 493Right-handed alpha
Helix 31
AD4
A
513 516Right-handed 310
Helix 32
AD5
A
517 525Right-handed alpha
Helix 33
AD6
A
536 538Right-handed 310
Helix 34
AD7
A
600 618Right-handed alpha
Helix 35
AD8
B
78 89Right-handed alpha
Helix 36
AD9
B
93 103Right-handed alpha
Helix 37
AE1
B
106 113Right-handed 310
Helix 38
AE2
B
114 122Right-handed alpha
Helix 39
AE3
B
125 139Right-handed alpha
Helix 40
AE4
B
161 169Right-handed alpha
Helix 41
AE5
B
170 175Right-handed alpha
Helix 42
AE6
B
176 179Right-handed 310
Helix 43
AE7
B
182 188Right-handed 310
Helix 44
AE8
B
195 218Right-handed alpha
Helix 45
AE9
B
219 222Right-handed 310
Helix 46
AF1
B
224 237Right-handed alpha
Helix 47
AF2
B
246 252Right-handed alpha
Helix 48
AF3
B
252 258Right-handed alpha
Helix 49
AF4
B
264 280Right-handed alpha
Helix 50
AF5
B
281 289Right-handed alpha
Helix 51
AF6
B
292 306Right-handed alpha
Helix 52
AF7
B
323 332Right-handed 310
Helix 53
AF8
B
341 356Right-handed alpha
Helix 54
AF9
B
362 369Right-handed alpha
Helix 55
AG1
B
398 416Right-handed alpha
Helix 56
AG2
B
419 437Right-handed alpha
Helix 57
AG3
B
445 447Right-handed 310
Helix 58
AG4
B
454 457Right-handed 310
Helix 59
AG5
B
458 463Right-handed alpha
Helix 60
AG6
B
464 465Right-handed 310
Helix 61
AG7
B
466 467Right-handed 310
Helix 62
AG8
B
468 475Right-handed alpha
Helix 63
AG9
B
478 480Right-handed 310
Helix 64
AH1
B
481 493Right-handed alpha
Helix 65
AH2
B
513 516Right-handed 310
Helix 66
AH3
B
517 525Right-handed alpha
Helix 67
AH4
B
536 538Right-handed 310
Helix 68
AH5
B
600 618Right-handed alpha
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There are 8 sheets in PDB entry 6BRH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 152first strand
Strand 2
A
156 160anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 377first strand
Strand 2
A
387 394anti-parallel
Strand 3
A
561 562parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 443first strand
Strand 2
A
449 450anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 503first strand
Strand 2
A
590 596anti-parallel
Strand 3
A
540 546anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 152first strand
Strand 2
B
156 160anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 378first strand
Strand 2
B
386 394anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
442 443first strand
Strand 2
B
449 450anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
498 503first strand
Strand 2
B
590 596anti-parallel
Strand 3
B
540 546anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il