Analysis of interatomic Contacts of Structural Units in PDB entry:
6BRK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BRK entry

There is 1 chain in PDB entry 6BRK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 72GLN 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6BRK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
78 88Right-handed alpha
Helix 2
AA2
A
93 104Right-handed alpha
Helix 3
AA3
A
106 113Right-handed 310
Helix 4
AA4
A
114 122Right-handed alpha
Helix 5
AA5
A
127 138Right-handed alpha
Helix 6
AA6
A
143 147Right-handed 310
Helix 7
AA7
A
161 169Right-handed alpha
Helix 8
AA8
A
170 175Right-handed alpha
Helix 9
AA9
A
176 179Right-handed 310
Helix 10
AB1
A
182 188Right-handed 310
Helix 11
AB2
A
195 218Right-handed alpha
Helix 12
AB3
A
219 222Right-handed 310
Helix 13
AB4
A
224 237Right-handed alpha
Helix 14
AB5
A
238 242Right-handed 310
Helix 15
AB6
A
246 252Right-handed alpha
Helix 16
AB7
A
252 258Right-handed alpha
Helix 17
AB8
A
264 281Right-handed alpha
Helix 18
AB9
A
281 289Right-handed alpha
Helix 19
AC1
A
292 306Right-handed alpha
Helix 20
AC2
A
323 332Right-handed 310
Helix 21
AC3
A
341 356Right-handed alpha
Helix 22
AC4
A
363 368Right-handed alpha
Helix 23
AC5
A
398 416Right-handed alpha
Helix 24
AC6
A
419 437Right-handed alpha
Helix 25
AC7
A
445 447Right-handed 310
Helix 26
AC8
A
454 457Right-handed 310
Helix 27
AC9
A
458 463Right-handed alpha
Helix 28
AD1
A
464 465Right-handed 310
Helix 29
AD2
A
466 467Right-handed 310
Helix 30
AD3
A
468 476Right-handed alpha
Helix 31
AD4
A
478 480Right-handed 310
Helix 32
AD5
A
481 493Right-handed alpha
Helix 33
AD6
A
514 516Right-handed 310
Helix 34
AD7
A
517 525Right-handed alpha
Helix 35
AD8
A
536 538Right-handed 310
Helix 36
AD9
A
600 618Right-handed alpha
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There are 4 sheets in PDB entry 6BRK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 152first strand
Strand 2
A
156 160anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
370 377first strand
Strand 2
A
387 394anti-parallel
Strand 3
A
561 562parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 443first strand
Strand 2
A
449 450anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 503first strand
Strand 2
A
590 596anti-parallel
Strand 3
A
540 546anti-parallel
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