Analysis of interatomic Contacts of Structural Units in PDB entry:
6BRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BRL entry

There is 1 chain in PDB entry 6BRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2LYS 503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6BRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 34Right-handed alpha
Helix 2
AA2
A
46 50Right-handed 310
Helix 3
AA3
A
53 66Right-handed alpha
Helix 4
AA4
A
83 86Right-handed 310
Helix 5
AA5
A
87 100Right-handed alpha
Helix 6
AA6
A
110 124Right-handed alpha
Helix 7
AA7
A
134 138Right-handed 310
Helix 8
AA8
A
145 155Right-handed alpha
Helix 9
AA9
A
186 188Right-handed 310
Helix 10
AB1
A
201 213Right-handed alpha
Helix 11
AB2
A
223 226Right-handed 310
Helix 12
AB3
A
227 239Right-handed alpha
Helix 13
AB4
A
261 269Right-handed alpha
Helix 14
AB5
A
295 305Right-handed alpha
Helix 15
AB6
A
318 326Right-handed alpha
Helix 16
AB7
A
327 331Right-handed 310
Helix 17
AB8
A
339 353Right-handed alpha
Helix 18
AB9
A
355 370Right-handed alpha
Helix 19
AC1
A
375 387Right-handed alpha
Helix 20
AC2
A
388 390Right-handed 310
Helix 21
AC3
A
393 399Right-handed alpha
Helix 22
AC4
A
400 404Right-handed 310
Helix 23
AC5
A
411 419Right-handed alpha
Helix 24
AC6
A
422 435Right-handed alpha
Helix 25
AC7
A
440 456Right-handed alpha
Helix 26
AC8
A
458 472Right-handed alpha
Helix 27
AC9
A
478 487Right-handed alpha
Helix 28
AD1
A
487 503Right-handed alpha
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There are 5 sheets in PDB entry 6BRL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
37 40parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
A
160 163anti-parallel
Strand 3
A
192 194anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 175first strand
Strand 2
A
179 184anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 221first strand
Strand 2
A
244 248parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 278first strand
Strand 2
A
285 286anti-parallel
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