Analysis of interatomic Contacts of Structural Units in PDB entry:
6BS6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BS6 entry

There are 2 chains in PDB entry 6BS6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 43	ASN 692
B	TRP 44	MET 649

There are 54 helices in PDB entry 6BS6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	67	72	Right-handed alpha
Helix 2	AA2	A	81	88	Right-handed alpha
Helix 3	AA3	A	88	95	Right-handed alpha
Helix 4	AA4	A	123	127	Right-handed 310
Helix 5	AA5	A	128	142	Right-handed alpha
Helix 6	AA6	A	159	166	Right-handed alpha
Helix 7	AA7	A	173	177	Right-handed 310
Helix 8	AA8	A	182	189	Right-handed alpha
Helix 9	AA9	A	198	203	Right-handed 310
Helix 10	AB1	A	204	206	Right-handed 310
Helix 11	AB2	A	357	363	Right-handed 310
Helix 12	AB3	A	364	379	Right-handed alpha
Helix 13	AB4	A	389	393	Right-handed 310
Helix 14	AB5	A	400	420	Right-handed alpha
Helix 15	AB6	A	435	440	Right-handed alpha
Helix 16	AB7	A	441	445	Right-handed 310
Helix 17	AB8	A	451	464	Right-handed alpha
Helix 18	AB9	A	469	485	Right-handed alpha
Helix 19	AC1	A	501	506	Right-handed alpha
Helix 20	AC2	A	509	523	Right-handed alpha
Helix 21	AC3	A	544	549	Right-handed 310
Helix 22	AC4	A	569	574	Right-handed alpha
Helix 23	AC5	A	576	583	Right-handed alpha
Helix 24	AC6	A	586	601	Right-handed alpha
Helix 25	AC7	A	601	606	Right-handed alpha
Helix 26	AC8	A	616	620	Right-handed 310
Helix 27	AC9	B	81	88	Right-handed alpha
Helix 28	AD1	B	88	95	Right-handed alpha
Helix 29	AD2	B	123	127	Right-handed 310
Helix 30	AD3	B	128	142	Right-handed alpha
Helix 31	AD4	B	159	168	Right-handed alpha
Helix 32	AD5	B	173	177	Right-handed 310
Helix 33	AD6	B	182	189	Right-handed alpha
Helix 34	AD7	B	192	196	Right-handed 310
Helix 35	AD8	B	198	203	Right-handed 310
Helix 36	AD9	B	204	206	Right-handed 310
Helix 37	AE1	B	229	231	Right-handed 310
Helix 38	AE2	B	357	363	Right-handed 310
Helix 39	AE3	B	364	380	Right-handed alpha
Helix 40	AE4	B	389	393	Right-handed 310
Helix 41	AE5	B	400	420	Right-handed alpha
Helix 42	AE6	B	435	440	Right-handed alpha
Helix 43	AE7	B	441	445	Right-handed 310
Helix 44	AE8	B	451	464	Right-handed alpha
Helix 45	AE9	B	469	483	Right-handed alpha
Helix 46	AF1	B	501	506	Right-handed alpha
Helix 47	AF2	B	509	523	Right-handed alpha
Helix 48	AF3	B	544	549	Right-handed 310
Helix 49	AF4	B	569	574	Right-handed alpha
Helix 50	AF5	B	576	583	Right-handed alpha
Helix 51	AF6	B	586	601	Right-handed alpha
Helix 52	AF7	B	601	606	Right-handed alpha
Helix 53	AF8	B	616	620	Right-handed 310
Helix 54	AF9	B	671	675	Right-handed 310

There are 15 sheets in PDB entry 6BS6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	667	670	anti-parallel
Strand 3	A	676	680	anti-parallel
Strand 4	A	649	653	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	489	491	first strand
Strand 2	A	448	450	parallel
Strand 3	A	427	430	parallel
Strand 4	A	384	387	parallel
Strand 5	A	145	150	parallel
Strand 6	A	99	102	parallel
Strand 7	A	63	65	parallel
Strand 8	A	528	530	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	156	first strand
Strand 2	A	350	352	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	180	first strand
Strand 2	A	340	342	anti-parallel
Strand 3	A	208	210	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	271	first strand
Strand 2	A	276	285	anti-parallel
Strand 3	A	218	227	anti-parallel
Strand 4	A	235	240	anti-parallel
Strand 5	A	320	321	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	258	261	anti-parallel
Strand 3	A	289	292	anti-parallel
Strand 4	A	304	305	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	332	333	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	608	611	first strand
Strand 2	A	626	633	anti-parallel
Strand 3	A	636	643	anti-parallel
Strand 4	A	685	690	anti-parallel
Strand 5	A	657	664	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	667	670	anti-parallel
Strand 3	B	676	680	anti-parallel
Strand 4	B	649	653	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	489	491	first strand
Strand 2	B	448	450	parallel
Strand 3	B	427	430	parallel
Strand 4	B	384	387	parallel
Strand 5	B	145	150	parallel
Strand 6	B	99	102	parallel
Strand 7	B	63	66	parallel
Strand 8	B	528	530	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	156	first strand
Strand 2	B	350	352	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	180	first strand
Strand 2	B	340	342	anti-parallel
Strand 3	B	208	210	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	271	first strand
Strand 2	B	276	285	anti-parallel
Strand 3	B	218	227	anti-parallel
Strand 4	B	235	240	anti-parallel
Strand 5	B	320	321	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	268	first strand
Strand 2	B	258	261	anti-parallel
Strand 3	B	289	292	anti-parallel
Strand 4	B	304	305	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	608	611	first strand
Strand 2	B	626	633	anti-parallel
Strand 3	B	636	643	anti-parallel
Strand 4	B	685	690	anti-parallel
Strand 5	B	657	664	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BS6

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BS6