Analysis of interatomic Contacts of Structural Units in PDB entry:
6BS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BS7 entry

There is 1 chain in PDB entry 6BS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6BS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 25Right-handed alpha
Helix 2
AA2
A
57 62Right-handed 310
Helix 3
AA3
A
76 90Right-handed alpha
Helix 4
AA4
A
93 97Right-handed alpha
Helix 5
AA5
A
108 119Right-handed alpha
Helix 6
AA6
A
133 143Right-handed alpha
Helix 7
AA7
A
148 153Right-handed 310
Helix 8
AA8
A
154 176Right-handed alpha
Helix 9
AA9
A
183 192Right-handed alpha
Helix 10
AB1
A
193 199Right-handed alpha
Helix 11
AB2
A
204 215Right-handed alpha
Helix 12
AB3
A
248 254Right-handed alpha
Helix 13
AB4
A
256 260Right-handed 310
Helix 14
AB5
A
285 295Right-handed alpha
Helix 15
AB6
A
313 324Right-handed alpha
Helix 16
AB7
A
332 337Right-handed 310
Helix 17
AB8
A
362 367Right-handed 310
Helix 18
AB9
A
388 392Right-handed 310
Helix 19
AC1
A
393 408Right-handed alpha
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There are 4 sheets in PDB entry 6BS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
98 101parallel
Strand 3
A
66 69parallel
Strand 4
A
30 33parallel
Strand 5
A
219 222parallel
Strand 6
A
4 9parallel
Strand 7
A
262 268parallel
Strand 8
A
327 331parallel
Strand 9
A
411 415parallel
Strand 10
A
423 425anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 273first strand
Strand 2
A
307 309anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
A
341 349parallel
Strand 3
A
355 356anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
A
341 349parallel
Strand 3
A
370 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il