Analysis of interatomic Contacts of Structural Units in PDB entry:
6BSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BSV entry

There are 2 chains in PDB entry 6BSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 116ALA 452
B
 PRO 116ALA 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6BSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
125 137Right-handed alpha
Helix 2
AA2
A
166 185Right-handed alpha
Helix 3
AA3
A
197 204Right-handed 310
Helix 4
AA4
A
205 217Right-handed alpha
Helix 5
AA5
A
241 245Right-handed 310
Helix 6
AA6
A
254 260Right-handed alpha
Helix 7
AA7
A
277 288Right-handed alpha
Helix 8
AA8
A
289 291Right-handed 310
Helix 9
AA9
A
294 308Right-handed alpha
Helix 10
AB1
A
317 329Right-handed alpha
Helix 11
AB2
A
329 334Right-handed alpha
Helix 12
AB3
A
348 354Right-handed 310
Helix 13
AB4
A
355 363Right-handed alpha
Helix 14
AB5
A
391 412Right-handed alpha
Helix 15
AB6
A
448 452Right-handed 310
Helix 16
AB7
B
125 137Right-handed alpha
Helix 17
AB8
B
165 186Right-handed alpha
Helix 18
AB9
B
201 204Right-handed 310
Helix 19
AC1
B
205 217Right-handed alpha
Helix 20
AC2
B
240 245Right-handed 310
Helix 21
AC3
B
254 260Right-handed alpha
Helix 22
AC4
B
277 288Right-handed alpha
Helix 23
AC5
B
289 291Right-handed 310
Helix 24
AC6
B
294 308Right-handed alpha
Helix 25
AC7
B
317 329Right-handed alpha
Helix 26
AC8
B
329 334Right-handed alpha
Helix 27
AC9
B
348 353Right-handed alpha
Helix 28
AD1
B
355 363Right-handed alpha
Helix 29
AD2
B
391 414Right-handed alpha
Helix 30
AD3
B
435 439Right-handed 310
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There are 8 sheets in PDB entry 6BSV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
143 145first strand
Strand 2
A
148 149anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 192first strand
Strand 2
A
151 156parallel
Strand 3
A
222 226parallel
Strand 4
A
267 275anti-parallel
Strand 5
A
249 253anti-parallel
Strand 6
A
337 340parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
375 377anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
426 428anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
143 145first strand
Strand 2
B
148 149anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
188 192first strand
Strand 2
B
151 156parallel
Strand 3
B
222 226parallel
Strand 4
B
267 275anti-parallel
Strand 5
B
249 253anti-parallel
Strand 6
B
337 340parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 232first strand
Strand 2
B
375 377anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
416 418first strand
Strand 2
B
426 428anti-parallel
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