Analysis of interatomic Contacts of Structural Units in PDB entry:
6BUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BUS entry

There are 4 chains in PDB entry 6BUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 HIS 319PHE 410
2
 HIS 319PHE 410
3
 ASP 316PHE 410
4
 HIS 319PHE 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 6BUS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
334 349Right-handed alpha
Helix 2
AA2
1
350 353Right-handed 310
Helix 3
AA3
1
382 393Right-handed alpha
Helix 4
AA4
2
334 349Right-handed alpha
Helix 5
AA5
2
350 353Right-handed 310
Helix 6
AA6
2
382 393Right-handed alpha
Helix 7
AA7
3
334 349Right-handed alpha
Helix 8
AA8
3
350 353Right-handed 310
Helix 9
AA9
3
382 393Right-handed alpha
Helix 10
AB1
4
334 349Right-handed alpha
Helix 11
AB2
4
350 353Right-handed 310
Helix 12
AB3
4
382 393Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6BUS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
360 363first strand
Strand 2
1
370 380anti-parallel
Strand 3
1
326 333anti-parallel
Strand 4
1
400 408anti-parallel
Strand 5
2
400 408anti-parallel
Strand 6
2
326 333anti-parallel
Strand 7
2
374 380anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
374 379first strand
Strand 2
3
326 333anti-parallel
Strand 3
3
400 408anti-parallel
Strand 4
4
400 408anti-parallel
Strand 5
4
327 333anti-parallel
Strand 6
4
374 380anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il