Analysis of interatomic Contacts of Structural Units in PDB entry:
6BUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BUU entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 11 chains in PDB entry 6BUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 144LYS 307
A
 PHE 309PHE 472
A
 TYR 474ALA 476
A
 GLY 478GLY 478
B
 ARG 144LYS 307
B
 PHE 309PHE 472
B
 TYR 474ALA 476
F
 GLY 1THR 6
F
 PHE 8GLU 10
G
 GLY 1THR 6
G
 PHE 8GLU 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6BUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
146 148Right-handed 310
Helix 2
AA2
A
183 189Right-handed alpha
Helix 3
AA3
A
191 204Right-handed alpha
Helix 4
AA4
A
234 240Right-handed alpha
Helix 5
AA5
A
246 269Right-handed alpha
Helix 6
AA6
A
276 278Right-handed 310
Helix 7
AA7
A
312 316Right-handed 310
Helix 8
AA8
A
317 322Right-handed alpha
Helix 9
AA9
A
329 345Right-handed alpha
Helix 10
AB1
A
353 364Right-handed alpha
Helix 11
AB2
A
373 384Right-handed alpha
Helix 12
AB3
A
387 391Right-handed 310
Helix 13
AB4
A
398 404Right-handed alpha
Helix 14
AB5
A
405 409Right-handed 310
Helix 15
AB6
A
412 418Right-handed alpha
Helix 16
AB7
A
439 444Right-handed alpha
Helix 17
AB8
B
146 148Right-handed 310
Helix 18
AB9
B
183 189Right-handed alpha
Helix 19
AC1
B
191 204Right-handed alpha
Helix 20
AC2
B
235 243Right-handed alpha
Helix 21
AC3
B
246 267Right-handed alpha
Helix 22
AC4
B
276 278Right-handed 310
Helix 23
AC5
B
312 316Right-handed 310
Helix 24
AC6
B
317 323Right-handed alpha
Helix 25
AC7
B
329 345Right-handed alpha
Helix 26
AC8
B
353 364Right-handed alpha
Helix 27
AC9
B
373 384Right-handed alpha
Helix 28
AD1
B
398 404Right-handed alpha
Helix 29
AD2
B
405 409Right-handed 310
Helix 30
AD3
B
412 418Right-handed alpha
Helix 31
AD4
B
439 444Right-handed alpha
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There are 6 sheets in PDB entry 6BUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 158first strand
Strand 2
A
163 169anti-parallel
Strand 3
A
175 182anti-parallel
Strand 4
A
222 227anti-parallel
Strand 5
A
213 218anti-parallel
Strand 6
A
474 475anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
A
288 290anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 311first strand
Strand 2
F
8 9anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 158first strand
Strand 2
B
163 169anti-parallel
Strand 3
B
175 182anti-parallel
Strand 4
B
222 227anti-parallel
Strand 5
B
213 218anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 234first strand
Strand 2
B
280 282anti-parallel
Strand 3
B
288 290anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 311first strand
Strand 2
G
8 9anti-parallel
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