Analysis of interatomic Contacts of Structural Units in PDB entry:
6BVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BVG entry

There are 2 chains in PDB entry 6BVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 5ILE 451
B
 SER 5ILE 451
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 6BVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 21Right-handed alpha
Helix 2
AA2
A
22 39Right-handed alpha
Helix 3
AA3
A
45 63Right-handed alpha
Helix 4
AA4
A
63 76Right-handed alpha
Helix 5
AA5
A
80 102Right-handed alpha
Helix 6
AA6
A
105 111Right-handed alpha
Helix 7
AA7
A
126 129Right-handed alpha
Helix 8
AA8
A
143 161Right-handed alpha
Helix 9
AA9
A
167 171Right-handed 310
Helix 10
AB1
A
174 177Right-handed 310
Helix 11
AB2
A
178 214Right-handed alpha
Helix 12
AB3
A
214 219Right-handed alpha
Helix 13
AB4
A
221 235Right-handed alpha
Helix 14
AB5
A
236 239Right-handed 310
Helix 15
AB6
A
240 250Right-handed alpha
Helix 16
AB7
A
271 288Right-handed alpha
Helix 17
AB8
A
291 301Right-handed alpha
Helix 18
AB9
A
307 316Right-handed alpha
Helix 19
AC1
A
316 327Right-handed alpha
Helix 20
AC2
A
330 332Right-handed 310
Helix 21
AC3
A
333 352Right-handed alpha
Helix 22
AC4
A
354 359Right-handed alpha
Helix 23
AC5
A
365 382Right-handed alpha
Helix 24
AC6
A
383 385Right-handed 310
Helix 25
AC7
A
393 401Right-handed alpha
Helix 26
AC8
A
401 408Right-handed alpha
Helix 27
AC9
A
410 440Right-handed alpha
Helix 28
AD1
B
6 21Right-handed alpha
Helix 29
AD2
B
22 39Right-handed alpha
Helix 30
AD3
B
45 63Right-handed alpha
Helix 31
AD4
B
63 76Right-handed alpha
Helix 32
AD5
B
80 102Right-handed alpha
Helix 33
AD6
B
105 111Right-handed alpha
Helix 34
AD7
B
126 129Right-handed alpha
Helix 35
AD8
B
143 161Right-handed alpha
Helix 36
AD9
B
167 171Right-handed 310
Helix 37
AE1
B
174 177Right-handed 310
Helix 38
AE2
B
178 214Right-handed alpha
Helix 39
AE3
B
214 219Right-handed alpha
Helix 40
AE4
B
221 235Right-handed alpha
Helix 41
AE5
B
236 239Right-handed 310
Helix 42
AE6
B
240 250Right-handed alpha
Helix 43
AE7
B
271 288Right-handed alpha
Helix 44
AE8
B
291 301Right-handed alpha
Helix 45
AE9
B
307 316Right-handed alpha
Helix 46
AF1
B
316 327Right-handed alpha
Helix 47
AF2
B
330 332Right-handed 310
Helix 48
AF3
B
333 351Right-handed alpha
Helix 49
AF4
B
354 359Right-handed alpha
Helix 50
AF5
B
365 382Right-handed alpha
Helix 51
AF6
B
383 385Right-handed 310
Helix 52
AF7
B
393 401Right-handed alpha
Helix 53
AF8
B
401 408Right-handed alpha
Helix 54
AF9
B
410 440Right-handed alpha
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There are 6 sheets in PDB entry 6BVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
122 125anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
136 139anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
267 269anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
122 125anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 133first strand
Strand 2
B
136 139anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
267 269anti-parallel
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