Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BWC entry

There are 6 chains in PDB entry 6BWC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 335
B	MET 1	GLN 332
C	MET 1	THR 336
D	MET 1	LEU 335
E	MET 1	THR 336
F	HIS 0	LEU 335

There are 80 helices in PDB entry 6BWC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	28	Right-handed alpha
Helix 2	AA2	A	39	50	Right-handed alpha
Helix 3	AA3	A	66	74	Right-handed alpha
Helix 4	AA4	A	88	95	Right-handed alpha
Helix 5	AA5	A	95	104	Right-handed alpha
Helix 6	AA6	A	104	117	Right-handed alpha
Helix 7	AA7	A	129	131	Right-handed 310
Helix 8	AA8	A	135	155	Right-handed alpha
Helix 9	AA9	A	176	189	Right-handed alpha
Helix 10	AB1	A	204	219	Right-handed alpha
Helix 11	AB2	A	234	247	Right-handed alpha
Helix 12	AB3	A	275	280	Right-handed alpha
Helix 13	AB4	A	321	332	Right-handed alpha
Helix 14	AB5	B	15	28	Right-handed alpha
Helix 15	AB6	B	39	50	Right-handed alpha
Helix 16	AB7	B	66	75	Right-handed alpha
Helix 17	AB8	B	90	95	Right-handed alpha
Helix 18	AB9	B	95	104	Right-handed alpha
Helix 19	AC1	B	104	117	Right-handed alpha
Helix 20	AC2	B	129	131	Right-handed 310
Helix 21	AC3	B	135	154	Right-handed alpha
Helix 22	AC4	B	176	189	Right-handed alpha
Helix 23	AC5	B	204	219	Right-handed alpha
Helix 24	AC6	B	234	247	Right-handed alpha
Helix 25	AC7	B	275	280	Right-handed alpha
Helix 26	AC8	B	321	331	Right-handed alpha
Helix 27	AC9	C	15	28	Right-handed alpha
Helix 28	AD1	C	39	50	Right-handed alpha
Helix 29	AD2	C	66	74	Right-handed alpha
Helix 30	AD3	C	88	95	Right-handed alpha
Helix 31	AD4	C	95	104	Right-handed alpha
Helix 32	AD5	C	104	117	Right-handed alpha
Helix 33	AD6	C	129	131	Right-handed 310
Helix 34	AD7	C	135	155	Right-handed alpha
Helix 35	AD8	C	176	189	Right-handed alpha
Helix 36	AD9	C	204	219	Right-handed alpha
Helix 37	AE1	C	234	250	Right-handed alpha
Helix 38	AE2	C	276	281	Right-handed 310
Helix 39	AE3	C	321	332	Right-handed alpha
Helix 40	AE4	D	15	27	Right-handed alpha
Helix 41	AE5	D	39	50	Right-handed alpha
Helix 42	AE6	D	53	55	Right-handed 310
Helix 43	AE7	D	66	74	Right-handed alpha
Helix 44	AE8	D	88	95	Right-handed alpha
Helix 45	AE9	D	95	104	Right-handed alpha
Helix 46	AF1	D	104	117	Right-handed alpha
Helix 47	AF2	D	129	131	Right-handed 310
Helix 48	AF3	D	135	155	Right-handed alpha
Helix 49	AF4	D	176	187	Right-handed alpha
Helix 50	AF5	D	204	219	Right-handed alpha
Helix 51	AF6	D	234	250	Right-handed alpha
Helix 52	AF7	D	275	280	Right-handed alpha
Helix 53	AF8	D	321	331	Right-handed alpha
Helix 54	AF9	E	15	27	Right-handed alpha
Helix 55	AG1	E	39	50	Right-handed alpha
Helix 56	AG2	E	53	55	Right-handed 310
Helix 57	AG3	E	66	74	Right-handed alpha
Helix 58	AG4	E	90	95	Right-handed alpha
Helix 59	AG5	E	95	104	Right-handed alpha
Helix 60	AG6	E	104	117	Right-handed alpha
Helix 61	AG7	E	129	131	Right-handed 310
Helix 62	AG8	E	135	154	Right-handed alpha
Helix 63	AG9	E	176	189	Right-handed alpha
Helix 64	AH1	E	204	219	Right-handed alpha
Helix 65	AH2	E	234	246	Right-handed alpha
Helix 66	AH3	E	275	280	Right-handed alpha
Helix 67	AH4	E	321	333	Right-handed alpha
Helix 68	AH5	F	15	28	Right-handed alpha
Helix 69	AH6	F	39	50	Right-handed alpha
Helix 70	AH7	F	66	74	Right-handed alpha
Helix 71	AH8	F	88	95	Right-handed alpha
Helix 72	AH9	F	95	104	Right-handed alpha
Helix 73	AI1	F	104	118	Right-handed alpha
Helix 74	AI2	F	129	131	Right-handed 310
Helix 75	AI3	F	135	155	Right-handed alpha
Helix 76	AI4	F	176	189	Right-handed alpha
Helix 77	AI5	F	204	219	Right-handed alpha
Helix 78	AI6	F	234	247	Right-handed alpha
Helix 79	AI7	F	275	282	Right-handed alpha
Helix 80	AI8	F	321	332	Right-handed alpha

There are 18 sheets in PDB entry 6BWC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	61	first strand
Strand 2	A	32	37	parallel
Strand 3	A	7	11	parallel
Strand 4	A	79	82	parallel
Strand 5	A	121	127	parallel
Strand 6	A	161	167	parallel
Strand 7	A	224	227	parallel
Strand 8	A	288	291	anti-parallel
Strand 9	A	283	284	anti-parallel
Strand 10	A	305	306	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	169	170	first strand
Strand 2	A	199	203	parallel
Strand 3	A	231	233	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	193	first strand
Strand 2	A	257	260	parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	61	first strand
Strand 2	B	32	37	parallel
Strand 3	B	7	11	parallel
Strand 4	B	79	82	parallel
Strand 5	B	121	127	parallel
Strand 6	B	161	167	parallel
Strand 7	B	224	227	parallel
Strand 8	B	288	291	anti-parallel
Strand 9	B	283	284	anti-parallel
Strand 10	B	305	306	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	170	first strand
Strand 2	B	199	203	parallel
Strand 3	B	231	233	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	190	193	first strand
Strand 2	B	257	260	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	61	first strand
Strand 2	C	32	37	parallel
Strand 3	C	7	11	parallel
Strand 4	C	79	82	parallel
Strand 5	C	121	127	parallel
Strand 6	C	161	167	parallel
Strand 7	C	224	227	parallel
Strand 8	C	288	291	anti-parallel
Strand 9	C	283	284	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	169	170	first strand
Strand 2	C	199	203	parallel
Strand 3	C	231	233	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	190	193	first strand
Strand 2	C	257	260	parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	61	first strand
Strand 2	D	32	37	parallel
Strand 3	D	7	11	parallel
Strand 4	D	79	82	parallel
Strand 5	D	121	127	parallel
Strand 6	D	161	167	parallel
Strand 7	D	224	227	parallel
Strand 8	D	288	291	anti-parallel
Strand 9	D	283	285	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	199	203	parallel
Strand 3	D	231	233	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	190	193	first strand
Strand 2	D	257	260	parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	57	61	first strand
Strand 2	E	32	37	parallel
Strand 3	E	7	11	parallel
Strand 4	E	79	82	parallel
Strand 5	E	121	127	parallel
Strand 6	E	161	167	parallel
Strand 7	E	224	227	parallel
Strand 8	E	288	291	anti-parallel
Strand 9	E	283	284	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	199	203	parallel
Strand 3	E	231	233	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	190	193	first strand
Strand 2	E	257	260	parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	57	61	first strand
Strand 2	F	32	37	parallel
Strand 3	F	7	11	parallel
Strand 4	F	79	82	parallel
Strand 5	F	121	127	parallel
Strand 6	F	161	167	parallel
Strand 7	F	224	227	parallel
Strand 8	F	288	291	anti-parallel
Strand 9	F	283	284	anti-parallel
Strand 10	F	305	306	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	169	170	first strand
Strand 2	F	199	203	parallel
Strand 3	F	231	233	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	190	193	first strand
Strand 2	F	257	260	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BWC

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWC