Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BWH entry

There are 3 chains in PDB entry 6BWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7HIS 213
B
 ASP 7HIS 213
C
 GLY 8HIS 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6BWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 30Right-handed 310
Helix 2
AA2
A
31 52Right-handed alpha
Helix 3
AA3
A
65 75Right-handed alpha
Helix 4
AA4
A
90 104Right-handed alpha
Helix 5
AA5
A
121 133Right-handed alpha
Helix 6
AA6
A
165 174Right-handed alpha
Helix 7
AA7
A
182 187Right-handed alpha
Helix 8
AA8
A
191 202Right-handed alpha
Helix 9
AA9
A
204 211Right-handed alpha
Helix 10
AB1
B
18 26Right-handed alpha
Helix 11
AB2
B
31 52Right-handed alpha
Helix 12
AB3
B
65 74Right-handed alpha
Helix 13
AB4
B
90 104Right-handed alpha
Helix 14
AB5
B
121 133Right-handed alpha
Helix 15
AB6
B
165 173Right-handed alpha
Helix 16
AB7
B
182 187Right-handed alpha
Helix 17
AB8
B
191 202Right-handed alpha
Helix 18
AB9
B
204 212Right-handed alpha
Helix 19
AC1
C
18 26Right-handed alpha
Helix 20
AC2
C
27 30Right-handed 310
Helix 21
AC3
C
33 51Right-handed alpha
Helix 22
AC4
C
65 74Right-handed alpha
Helix 23
AC5
C
90 105Right-handed alpha
Helix 24
AC6
C
121 134Right-handed alpha
Helix 25
AC7
C
165 172Right-handed alpha
Helix 26
AC8
C
182 187Right-handed alpha
Helix 27
AC9
C
191 202Right-handed alpha
Helix 28
AD1
C
204 211Right-handed alpha
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There are 3 sheets in PDB entry 6BWH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
56 63parallel
Strand 3
A
10 15parallel
Strand 4
A
109 113parallel
Strand 5
A
148 154anti-parallel
Strand 6
A
137 141anti-parallel
Strand 7
A
176 177parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
56 63parallel
Strand 3
B
10 15parallel
Strand 4
B
109 114parallel
Strand 5
B
148 154anti-parallel
Strand 6
B
137 141anti-parallel
Strand 7
B
176 177parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
78 81first strand
Strand 2
C
56 63parallel
Strand 3
C
10 15parallel
Strand 4
C
109 114parallel
Strand 5
C
148 154anti-parallel
Strand 6
C
138 141anti-parallel
Strand 7
C
176 177parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il