Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BWJ entry

There are 2 chains in PDB entry 6BWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 70GLY 727
B
 ASN 71GLY 727
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6BWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 85Right-handed alpha
Helix 2
AA2
A
86 91Right-handed 310
Helix 3
AA3
A
92 101Right-handed alpha
Helix 4
AA4
A
106 110Right-handed 310
Helix 5
AA5
A
117 125Right-handed alpha
Helix 6
AA6
A
133 144Right-handed alpha
Helix 7
AA7
A
164 172Right-handed alpha
Helix 8
AA8
A
174 184Right-handed alpha
Helix 9
AA9
A
210 218Right-handed alpha
Helix 10
AB1
A
220 230Right-handed alpha
Helix 11
AB2
A
246 255Right-handed alpha
Helix 12
AB3
A
258 280Right-handed alpha
Helix 13
AB4
A
284 288Right-handed 310
Helix 14
AB5
A
295 303Right-handed alpha
Helix 15
AB6
A
305 314Right-handed alpha
Helix 16
AB7
A
353 361Right-handed alpha
Helix 17
AB8
A
366 372Right-handed alpha
Helix 18
AB9
A
373 411Right-handed alpha
Helix 19
AC1
A
428 457Right-handed alpha
Helix 20
AC2
A
468 490Right-handed alpha
Helix 21
AC3
A
494 510Right-handed alpha
Helix 22
AC4
A
511 516Right-handed 310
Helix 23
AC5
A
517 534Right-handed alpha
Helix 24
AC6
A
534 558Right-handed alpha
Helix 25
AC7
A
590 604Right-handed alpha
Helix 26
AC8
A
615 649Right-handed alpha
Helix 27
AC9
A
650 672Right-handed alpha
Helix 28
AD1
B
74 85Right-handed alpha
Helix 29
AD2
B
86 91Right-handed 310
Helix 30
AD3
B
92 101Right-handed alpha
Helix 31
AD4
B
106 110Right-handed 310
Helix 32
AD5
B
117 125Right-handed alpha
Helix 33
AD6
B
133 144Right-handed alpha
Helix 34
AD7
B
164 172Right-handed alpha
Helix 35
AD8
B
174 184Right-handed alpha
Helix 36
AD9
B
194 198Right-handed 310
Helix 37
AE1
B
210 218Right-handed alpha
Helix 38
AE2
B
220 230Right-handed alpha
Helix 39
AE3
B
246 255Right-handed alpha
Helix 40
AE4
B
258 280Right-handed alpha
Helix 41
AE5
B
284 288Right-handed 310
Helix 42
AE6
B
295 303Right-handed alpha
Helix 43
AE7
B
305 314Right-handed alpha
Helix 44
AE8
B
321 325Right-handed 310
Helix 45
AE9
B
353 361Right-handed alpha
Helix 46
AF1
B
366 372Right-handed alpha
Helix 47
AF2
B
373 387Right-handed alpha
Helix 48
AF3
B
387 411Right-handed alpha
Helix 49
AF4
B
428 458Right-handed alpha
Helix 50
AF5
B
468 490Right-handed alpha
Helix 51
AF6
B
494 509Right-handed alpha
Helix 52
AF7
B
510 516Right-handed 310
Helix 53
AF8
B
517 558Right-handed alpha
Helix 54
AF9
B
590 604Right-handed alpha
Helix 55
AG1
B
617 649Right-handed alpha
Helix 56
AG2
B
650 672Right-handed alpha
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There are 2 sheets in PDB entry 6BWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 333first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
697 708anti-parallel
Strand 4
A
685 691anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 333first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
698 708anti-parallel
Strand 4
B
685 690anti-parallel
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