Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BWL entry

There is 1 chain in PDB entry 6BWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6BWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
37 45Right-handed 310
Helix 3
AA3
A
60 70Right-handed alpha
Helix 4
AA4
A
84 91Right-handed alpha
Helix 5
AA5
A
91 100Right-handed alpha
Helix 6
AA6
A
100 114Right-handed alpha
Helix 7
AA7
A
122 126Right-handed 310
Helix 8
AA8
A
145 166Right-handed alpha
Helix 9
AA9
A
189 200Right-handed alpha
Helix 10
AB1
A
219 232Right-handed alpha
Helix 11
AB2
A
233 236Right-handed 310
Helix 12
AB3
A
250 259Right-handed alpha
Helix 13
AB4
A
271 275Right-handed 310
Helix 14
AB5
A
283 291Right-handed alpha
Helix 15
AB6
A
297 312Right-handed alpha
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There are 4 sheets in PDB entry 6BWL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 54first strand
Strand 2
A
26 30parallel
Strand 3
A
2 6parallel
Strand 4
A
75 78parallel
Strand 5
A
116 120parallel
Strand 6
A
169 174parallel
Strand 7
A
239 242parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
217 218parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
264 267parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 214first strand
Strand 2
A
248 249anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il