Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BWM entry

There are 2 chains in PDB entry 6BWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 69GLY 727
B
 ASP 69GLY 727
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 6BWM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 85Right-handed alpha
Helix 2
AA2
A
86 91Right-handed 310
Helix 3
AA3
A
92 101Right-handed alpha
Helix 4
AA4
A
117 125Right-handed alpha
Helix 5
AA5
A
133 144Right-handed alpha
Helix 6
AA6
A
164 172Right-handed alpha
Helix 7
AA7
A
174 184Right-handed alpha
Helix 8
AA8
A
210 218Right-handed alpha
Helix 9
AA9
A
220 230Right-handed alpha
Helix 10
AB1
A
246 254Right-handed alpha
Helix 11
AB2
A
258 280Right-handed alpha
Helix 12
AB3
A
284 288Right-handed 310
Helix 13
AB4
A
295 304Right-handed alpha
Helix 14
AB5
A
305 314Right-handed alpha
Helix 15
AB6
A
321 325Right-handed 310
Helix 16
AB7
A
353 361Right-handed alpha
Helix 17
AB8
A
366 373Right-handed alpha
Helix 18
AB9
A
373 412Right-handed alpha
Helix 19
AC1
A
428 457Right-handed alpha
Helix 20
AC2
A
458 464Right-handed alpha
Helix 21
AC3
A
468 490Right-handed alpha
Helix 22
AC4
A
494 510Right-handed alpha
Helix 23
AC5
A
511 516Right-handed 310
Helix 24
AC6
A
519 558Right-handed alpha
Helix 25
AC7
A
591 604Right-handed alpha
Helix 26
AC8
A
615 648Right-handed alpha
Helix 27
AC9
A
649 672Right-handed alpha
Helix 28
AD1
A
675 679Right-handed 310
Helix 29
AD2
B
74 85Right-handed alpha
Helix 30
AD3
B
86 91Right-handed 310
Helix 31
AD4
B
92 101Right-handed alpha
Helix 32
AD5
B
117 125Right-handed alpha
Helix 33
AD6
B
133 144Right-handed alpha
Helix 34
AD7
B
164 172Right-handed alpha
Helix 35
AD8
B
174 184Right-handed alpha
Helix 36
AD9
B
210 218Right-handed alpha
Helix 37
AE1
B
220 230Right-handed alpha
Helix 38
AE2
B
246 254Right-handed alpha
Helix 39
AE3
B
258 280Right-handed alpha
Helix 40
AE4
B
284 288Right-handed 310
Helix 41
AE5
B
295 304Right-handed alpha
Helix 42
AE6
B
305 314Right-handed alpha
Helix 43
AE7
B
321 325Right-handed 310
Helix 44
AE8
B
353 361Right-handed alpha
Helix 45
AE9
B
368 373Right-handed alpha
Helix 46
AF1
B
373 411Right-handed alpha
Helix 47
AF2
B
428 457Right-handed alpha
Helix 48
AF3
B
458 464Right-handed alpha
Helix 49
AF4
B
465 467Right-handed 310
Helix 50
AF5
B
468 491Right-handed alpha
Helix 51
AF6
B
494 510Right-handed alpha
Helix 52
AF7
B
511 516Right-handed 310
Helix 53
AF8
B
519 535Right-handed alpha
Helix 54
AF9
B
537 558Right-handed alpha
Helix 55
AG1
B
591 604Right-handed alpha
Helix 56
AG2
B
617 646Right-handed alpha
Helix 57
AG3
B
647 672Right-handed alpha
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There are 2 sheets in PDB entry 6BWM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 333first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
697 708anti-parallel
Strand 4
A
685 691anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 333first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
697 708anti-parallel
Strand 4
B
685 691anti-parallel
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