Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BWT entry

There are 4 chains in PDB entry 6BWT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASP 315
B	ALA 2	LEU 314
C	ASN 3	ASP 315
D	ASN 3	LEU 314

There are 36 helices in PDB entry 6BWT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	26	Right-handed alpha
Helix 2	AA2	A	120	126	Right-handed alpha
Helix 3	AA3	A	134	139	Right-handed alpha
Helix 4	AA4	A	140	143	Right-handed 310
Helix 5	AA5	A	153	165	Right-handed alpha
Helix 6	AA6	A	182	196	Right-handed alpha
Helix 7	AA7	A	247	251	Right-handed 310
Helix 8	AA8	A	283	287	Right-handed 310
Helix 9	AA9	A	292	313	Right-handed alpha
Helix 10	AB1	B	13	26	Right-handed alpha
Helix 11	AB2	B	122	127	Right-handed alpha
Helix 12	AB3	B	134	139	Right-handed alpha
Helix 13	AB4	B	140	143	Right-handed 310
Helix 14	AB5	B	153	165	Right-handed alpha
Helix 15	AB6	B	182	196	Right-handed alpha
Helix 16	AB7	B	247	251	Right-handed 310
Helix 17	AB8	B	283	286	Right-handed 310
Helix 18	AB9	B	292	313	Right-handed alpha
Helix 19	AC1	C	13	26	Right-handed alpha
Helix 20	AC2	C	122	127	Right-handed alpha
Helix 21	AC3	C	134	139	Right-handed alpha
Helix 22	AC4	C	140	143	Right-handed 310
Helix 23	AC5	C	153	165	Right-handed alpha
Helix 24	AC6	C	182	196	Right-handed alpha
Helix 25	AC7	C	247	251	Right-handed 310
Helix 26	AC8	C	283	286	Right-handed 310
Helix 27	AC9	C	292	313	Right-handed alpha
Helix 28	AD1	D	13	26	Right-handed alpha
Helix 29	AD2	D	120	126	Right-handed alpha
Helix 30	AD3	D	134	139	Right-handed alpha
Helix 31	AD4	D	140	143	Right-handed 310
Helix 32	AD5	D	153	165	Right-handed alpha
Helix 33	AD6	D	182	196	Right-handed alpha
Helix 34	AD7	D	247	251	Right-handed 310
Helix 35	AD8	D	283	287	Right-handed 310
Helix 36	AD9	D	292	313	Right-handed alpha

There are 24 sheets in PDB entry 6BWT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	31	34	parallel
Strand 3	A	4	10	parallel
Strand 4	A	101	109	parallel
Strand 5	A	93	96	anti-parallel
Strand 6	A	85	87	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	80	first strand
Strand 2	A	31	34	parallel
Strand 3	A	4	10	parallel
Strand 4	A	101	109	parallel
Strand 5	A	279	281	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	113	115	first strand
Strand 2	A	243	245	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	236	239	parallel
Strand 3	A	146	150	parallel
Strand 4	A	169	173	parallel
Strand 5	A	198	201	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	212	first strand
Strand 2	A	215	223	anti-parallel
Strand 3	A	229	233	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	257	first strand
Strand 2	A	260	261	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	31	34	parallel
Strand 3	B	4	10	parallel
Strand 4	B	101	109	parallel
Strand 5	B	93	96	anti-parallel
Strand 6	B	85	87	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	80	first strand
Strand 2	B	31	34	parallel
Strand 3	B	4	10	parallel
Strand 4	B	101	109	parallel
Strand 5	B	279	281	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	115	first strand
Strand 2	B	243	245	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	236	239	parallel
Strand 3	B	146	150	parallel
Strand 4	B	169	173	parallel
Strand 5	B	198	201	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	212	first strand
Strand 2	B	215	223	anti-parallel
Strand 3	B	229	233	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	257	first strand
Strand 2	B	260	261	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	80	first strand
Strand 2	C	31	34	parallel
Strand 3	C	4	10	parallel
Strand 4	C	101	109	parallel
Strand 5	C	93	96	anti-parallel
Strand 6	C	85	87	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	80	first strand
Strand 2	C	31	34	parallel
Strand 3	C	4	10	parallel
Strand 4	C	101	109	parallel
Strand 5	C	279	281	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	113	115	first strand
Strand 2	C	243	245	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	132	first strand
Strand 2	C	236	239	parallel
Strand 3	C	146	150	parallel
Strand 4	C	169	173	parallel
Strand 5	C	198	201	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	212	first strand
Strand 2	C	215	223	anti-parallel
Strand 3	C	229	233	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	257	first strand
Strand 2	C	260	261	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	80	first strand
Strand 2	D	31	34	parallel
Strand 3	D	4	10	parallel
Strand 4	D	101	109	parallel
Strand 5	D	93	96	anti-parallel
Strand 6	D	85	87	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	80	first strand
Strand 2	D	31	34	parallel
Strand 3	D	4	10	parallel
Strand 4	D	101	109	parallel
Strand 5	D	279	281	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	115	first strand
Strand 2	D	243	245	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	236	239	parallel
Strand 3	D	146	150	parallel
Strand 4	D	169	173	parallel
Strand 5	D	198	201	parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	212	first strand
Strand 2	D	215	223	anti-parallel
Strand 3	D	229	233	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	257	first strand
Strand 2	D	260	261	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BWT

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWT