Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BWY entry

There are 8 chains in PDB entry 6BWY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
I	A 1	C 7
C	A 1	C 7
D	A 1	C 7
F	A 1	C 7
A	GLN 30	ASN 381
B	GLN 30	ASN 381
E	GLN 30	ASN 381
G	GLN 30	SER 159

There are 37 helices in PDB entry 6BWY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	54	Right-handed alpha
Helix 2	AA2	A	176	191	Right-handed alpha
Helix 3	AA3	A	198	206	Right-handed alpha
Helix 4	AA4	A	257	265	Right-handed alpha
Helix 5	AA5	A	288	302	Right-handed alpha
Helix 6	AA6	A	320	331	Right-handed alpha
Helix 7	AA7	A	339	350	Right-handed alpha
Helix 8	AA8	A	363	381	Right-handed alpha
Helix 9	AA9	B	33	38	Right-handed alpha
Helix 10	AB1	B	49	54	Right-handed alpha
Helix 11	AB2	B	176	194	Right-handed alpha
Helix 12	AB3	B	198	206	Right-handed alpha
Helix 13	AB4	B	257	266	Right-handed alpha
Helix 14	AB5	B	267	269	Right-handed 310
Helix 15	AB6	B	288	302	Right-handed alpha
Helix 16	AB7	B	320	330	Right-handed alpha
Helix 17	AB8	B	339	350	Right-handed alpha
Helix 18	AB9	B	364	379	Right-handed alpha
Helix 19	AC1	E	49	54	Right-handed alpha
Helix 20	AC2	E	176	194	Right-handed alpha
Helix 21	AC3	E	198	206	Right-handed alpha
Helix 22	AC4	E	257	266	Right-handed alpha
Helix 23	AC5	E	267	270	Right-handed 310
Helix 24	AC6	E	288	302	Right-handed alpha
Helix 25	AC7	E	320	330	Right-handed alpha
Helix 26	AC8	E	339	350	Right-handed alpha
Helix 27	AC9	E	363	379	Right-handed alpha
Helix 28	AD1	G	49	54	Right-handed alpha
Helix 29	AD2	G	176	191	Right-handed alpha
Helix 30	AD3	G	198	206	Right-handed alpha
Helix 31	AD4	G	236	239	Right-handed 310
Helix 32	AD5	G	257	265	Right-handed alpha
Helix 33	AD6	G	266	270	Right-handed 310
Helix 34	AD7	G	288	302	Right-handed alpha
Helix 35	AD8	G	320	330	Right-handed alpha
Helix 36	AD9	G	339	350	Right-handed alpha
Helix 37	AE1	G	363	379	Right-handed alpha

There are 13 sheets in PDB entry 6BWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	42	first strand
Strand 2	A	45	48	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	77	first strand
Strand 2	A	85	92	anti-parallel
Strand 3	A	103	109	anti-parallel
Strand 4	A	139	151	parallel
Strand 5	A	124	134	anti-parallel
Strand 6	A	61	77	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	243	first strand
Strand 2	A	219	228	anti-parallel
Strand 3	A	277	285	anti-parallel
Strand 4	A	305	313	parallel
Strand 5	A	334	337	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	42	first strand
Strand 2	B	45	48	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	77	first strand
Strand 2	B	85	92	anti-parallel
Strand 3	B	103	109	anti-parallel
Strand 4	B	139	151	parallel
Strand 5	B	124	134	anti-parallel
Strand 6	B	61	77	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	243	first strand
Strand 2	B	219	228	anti-parallel
Strand 3	B	277	285	anti-parallel
Strand 4	B	305	313	parallel
Strand 5	B	334	337	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	42	first strand
Strand 2	E	45	48	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	61	77	first strand
Strand 2	E	85	92	anti-parallel
Strand 3	E	103	109	anti-parallel
Strand 4	E	139	151	parallel
Strand 5	E	124	134	anti-parallel
Strand 6	E	61	77	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	231	243	first strand
Strand 2	E	219	228	anti-parallel
Strand 3	E	277	285	anti-parallel
Strand 4	E	305	313	parallel
Strand 5	E	334	337	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	42	first strand
Strand 2	G	45	48	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	61	77	first strand
Strand 2	G	85	92	anti-parallel
Strand 3	G	103	109	anti-parallel
Strand 4	G	139	151	parallel
Strand 5	G	124	134	anti-parallel
Strand 6	G	61	77	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	231	234	first strand
Strand 2	G	219	228	anti-parallel
Strand 3	G	240	243	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	231	234	first strand
Strand 2	G	219	228	anti-parallel
Strand 3	G	277	285	anti-parallel
Strand 4	G	305	313	parallel
Strand 5	G	334	337	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BWY

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BWY