Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BXB entry

There are 2 chains in PDB entry 6BXB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	LEU 463
B	GLY 1	PHE 465

There are 33 helices in PDB entry 6BXB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	8	Right-handed alpha
Helix 2	AA2	A	12	18	Right-handed alpha
Helix 3	AA3	A	40	47	Right-handed alpha
Helix 4	AA4	A	50	54	Right-handed 310
Helix 5	AA5	A	125	143	Right-handed alpha
Helix 6	AA6	A	164	172	Right-handed alpha
Helix 7	AA7	A	173	178	Right-handed alpha
Helix 8	AA8	A	189	201	Right-handed alpha
Helix 9	AA9	A	203	207	Right-handed 310
Helix 10	AB1	A	230	234	Right-handed 310
Helix 11	AB2	A	245	248	Right-handed 310
Helix 12	AB3	A	249	255	Right-handed alpha
Helix 13	AB4	A	256	260	Right-handed 310
Helix 14	AB5	A	263	267	Right-handed alpha
Helix 15	AB6	A	276	285	Right-handed alpha
Helix 16	AB7	A	286	288	Right-handed 310
Helix 17	AB8	A	372	376	Right-handed 310
Helix 18	AB9	A	419	423	Right-handed 310
Helix 19	AC1	A	430	434	Right-handed 310
Helix 20	AC2	B	12	20	Right-handed alpha
Helix 21	AC3	B	40	47	Right-handed alpha
Helix 22	AC4	B	50	52	Right-handed 310
Helix 23	AC5	B	125	143	Right-handed alpha
Helix 24	AC6	B	164	172	Right-handed alpha
Helix 25	AC7	B	173	179	Right-handed alpha
Helix 26	AC8	B	189	200	Right-handed alpha
Helix 27	AC9	B	245	248	Right-handed 310
Helix 28	AD1	B	249	255	Right-handed alpha
Helix 29	AD2	B	274	278	Right-handed 310
Helix 30	AD3	B	279	282	Right-handed 310
Helix 31	AD4	B	283	290	Right-handed alpha
Helix 32	AD5	B	372	376	Right-handed 310
Helix 33	AD6	B	430	434	Right-handed 310

There are 14 sheets in PDB entry 6BXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	25	first strand
Strand 2	A	38	39	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	65	first strand
Strand 2	A	87	92	anti-parallel
Strand 3	A	362	368	parallel
Strand 4	A	348	355	anti-parallel
Strand 5	A	291	297	anti-parallel
Strand 6	A	322	324	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	A	97	105	anti-parallel
Strand 3	A	331	340	anti-parallel
Strand 4	A	303	310	anti-parallel
Strand 5	A	316	318	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	163	first strand
Strand 2	A	148	155	anti-parallel
Strand 3	A	112	119	parallel
Strand 4	A	213	220	parallel
Strand 5	A	237	243	parallel
Strand 6	A	268	271	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	393	first strand
Strand 2	A	396	399	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	439	first strand
Strand 2	A	442	445	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	460	462	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	39	first strand
Strand 2	B	24	26	anti-parallel
Strand 3	B	54	55	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	65	first strand
Strand 2	B	87	92	anti-parallel
Strand 3	B	362	368	parallel
Strand 4	B	348	355	anti-parallel
Strand 5	B	291	297	anti-parallel
Strand 6	B	322	324	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	83	84	first strand
Strand 2	B	97	105	anti-parallel
Strand 3	B	331	340	anti-parallel
Strand 4	B	303	310	anti-parallel
Strand 5	B	316	318	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	160	first strand
Strand 2	B	148	155	anti-parallel
Strand 3	B	112	119	parallel
Strand 4	B	213	220	parallel
Strand 5	B	241	243	parallel
Strand 6	B	269	271	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	390	393	first strand
Strand 2	B	396	399	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	436	438	first strand
Strand 2	B	443	445	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	454	first strand
Strand 2	B	460	463	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BXB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXB