Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BXF entry

There are 2 chains in PDB entry 6BXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1LEU 463
B
 GLY 1TYR 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6BXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed alpha
Helix 2
AA2
A
12 18Right-handed alpha
Helix 3
AA3
A
125 142Right-handed alpha
Helix 4
AA4
A
164 172Right-handed alpha
Helix 5
AA5
A
173 178Right-handed alpha
Helix 6
AA6
A
189 200Right-handed alpha
Helix 7
AA7
A
203 207Right-handed 310
Helix 8
AA8
A
230 234Right-handed 310
Helix 9
AA9
A
244 248Right-handed 310
Helix 10
AB1
A
251 259Right-handed 310
Helix 11
AB2
A
263 268Right-handed alpha
Helix 12
AB3
A
273 275Right-handed 310
Helix 13
AB4
A
276 285Right-handed alpha
Helix 14
AB5
A
419 424Right-handed 310
Helix 15
AB6
A
430 434Right-handed 310
Helix 16
AB7
B
3 8Right-handed alpha
Helix 17
AB8
B
12 17Right-handed alpha
Helix 18
AB9
B
40 47Right-handed alpha
Helix 19
AC1
B
125 143Right-handed alpha
Helix 20
AC2
B
164 172Right-handed alpha
Helix 21
AC3
B
173 178Right-handed alpha
Helix 22
AC4
B
189 201Right-handed alpha
Helix 23
AC5
B
244 248Right-handed 310
Helix 24
AC6
B
249 255Right-handed alpha
Helix 25
AC7
B
273 278Right-handed 310
Helix 26
AC8
B
284 289Right-handed alpha
Helix 27
AC9
B
372 376Right-handed 310
Helix 28
AD1
B
411 415Right-handed 310
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There are 11 sheets in PDB entry 6BXF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
38 39anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
362 368parallel
Strand 4
A
348 355anti-parallel
Strand 5
A
292 297anti-parallel
Strand 6
A
322 323anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
331 339anti-parallel
Strand 4
A
307 310anti-parallel
Strand 5
A
316 318anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 163first strand
Strand 2
A
148 155anti-parallel
Strand 3
A
112 119parallel
Strand 4
A
213 220parallel
Strand 5
A
237 242parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 393first strand
Strand 2
A
396 399anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 439first strand
Strand 2
A
442 445anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
38 39anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
87 92anti-parallel
Strand 3
B
362 368parallel
Strand 4
B
348 355anti-parallel
Strand 5
B
291 297anti-parallel
Strand 6
B
322 324anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
97 105anti-parallel
Strand 3
B
331 340anti-parallel
Strand 4
B
303 310anti-parallel
Strand 5
B
316 318anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 161first strand
Strand 2
B
148 155anti-parallel
Strand 3
B
112 119parallel
Strand 4
B
213 220parallel
Strand 5
B
237 242parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
390 393first strand
Strand 2
B
396 399anti-parallel
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