Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BXJ entry

There is 1 chain in PDB entry 6BXJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1PRO 625
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6BXJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 20Right-handed alpha
Helix 2
AA2
A
40 47Right-handed alpha
Helix 3
AA3
A
125 143Right-handed alpha
Helix 4
AA4
A
164 172Right-handed alpha
Helix 5
AA5
A
173 178Right-handed alpha
Helix 6
AA6
A
189 201Right-handed alpha
Helix 7
AA7
A
203 207Right-handed 310
Helix 8
AA8
A
230 234Right-handed 310
Helix 9
AA9
A
245 248Right-handed 310
Helix 10
AB1
A
249 255Right-handed alpha
Helix 11
AB2
A
256 260Right-handed 310
Helix 12
AB3
A
263 267Right-handed alpha
Helix 13
AB4
A
273 279Right-handed 310
Helix 14
AB5
A
280 288Right-handed alpha
Helix 15
AB6
A
372 378Right-handed 310
Helix 16
AB7
A
430 434Right-handed 310
Helix 17
AB8
A
501 505Right-handed 310
Helix 18
AB9
A
510 514Right-handed 310
Helix 19
AC1
A
543 557Right-handed alpha
Helix 20
AC2
A
560 565Right-handed alpha
Helix 21
AC3
A
567 572Right-handed alpha
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There are 12 sheets in PDB entry 6BXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
38 39anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
362 368parallel
Strand 4
A
349 355anti-parallel
Strand 5
A
292 297anti-parallel
Strand 6
A
322 323anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
331 340anti-parallel
Strand 4
A
303 310anti-parallel
Strand 5
A
316 318anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 163first strand
Strand 2
A
148 155anti-parallel
Strand 3
A
112 119parallel
Strand 4
A
213 220parallel
Strand 5
A
237 243parallel
Strand 6
A
268 271parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 380first strand
Strand 2
A
391 393anti-parallel
Strand 3
A
396 398anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 439first strand
Strand 2
A
442 445anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 454first strand
Strand 2
A
460 461anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 468first strand
Strand 2
A
471 472anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 480first strand
Strand 2
A
483 486anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 491first strand
Strand 2
A
497 498anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
516 519first strand
Strand 2
A
522 525anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 579first strand
Strand 2
A
614 619parallel
Strand 3
A
601 608anti-parallel
Strand 4
A
589 595anti-parallel
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